Pseudomonas syringae pv. tomato DC3000: PSPTO_2017
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Entry
PSPTO_2017 CDS
T00118
Name
(GenBank) conserved hypothetical protein
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pst03009
]
PSPTO_2017
Enzymes [BR:
pst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
PSPTO_2017
Ribosome biogenesis [BR:
pst03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSPTO_2017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RLMM_N
RlmM_FDX
FtsJ
Motif
Other DBs
NCBI-ProteinID:
AAO55535
UniProt:
Q884S1
LinkDB
All DBs
Position
2205885..2206958
Genome browser
AA seq
357 aa
AA seq
DB search
MNTLFMHCRPGFEGEVCSEIADLAARLDVSGYAKARPDTACAEFICTEADGAERLMNGQR
FDTLIFPRQWARGLFLDLPETDRISVILAQLSTFPTCGSLWLEVVDTNDGKELSNFCKKF
EAPLRKALTQAGKLVDDPRKPRLLLTFKSGREVFLGLAEADNSAMWPMGIPRLKFPREAP
SRSTLKLEEAWHHFIPRDQWDERLSGDMTGVDLGAAPGGWTYQLVRRGMLVTAIDNGPMA
ESLMDTGLVQHLMADGFTYKPRHPVDWMVCDIVEKPARNAALLETWLGEGLCREAVVNLK
LPMKQRYAEVRRLLDRIEEGFQARGVRVSIGCKQLYHDREEVTCHLRRLDVAKAARK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgctgtttatgcactgccggcccggttttgagggcgaagtctgttcggagatc
gccgacctcgctgcacgcctggacgtttccggttacgccaaggcgcgacccgacacggcc
tgcgccgaattcatctgcactgaagcggatggcgccgaacggctaatgaacggtcagcgc
ttcgacacgttgatcttccctcgtcagtgggcgcggggcctgttccttgatctgccggaa
accgaccgcatcagcgtgattcttgcgcaactgtcgacgttcccgacctgcggcagcctg
tggctggaagttgtggataccaacgatggcaaggagctgtcgaatttctgcaagaagttc
gaggcacccctgcgcaaggccctgacccaggctggcaagctggtcgatgacccacgcaaa
ccgcgcctgctgctgaccttcaagagcggtcgcgaagtgtttctcggcctggccgaagcc
gataactcggcgatgtggccgatgggcatcccgcgcttgaagttcccccgcgaagcaccc
agtcgctcgaccttgaagctcgaagaagcgtggcaccactttatccccagagatcagtgg
gacgagcgtctttcgggggacatgacgggtgtggatctgggcgcagcgcccggcggctgg
acctaccaactggtgcgccggggaatgctggtgaccgccatcgacaatggcccgatggcc
gaaagcctgatggacaccgggctggtgcagcacttgatggcggacggttttacctacaag
cctcgtcaccctgtggactggatggtctgtgacatcgtcgaaaaaccggcgcgcaatgcg
gccttgctggaaacctggctgggtgaagggctgtgccgtgaagcagtggtcaacctcaag
ctgccgatgaaacagcgctacgctgaagtgcgccgcttgctcgaccgcatcgaagaaggt
tttcaggcgcgcggtgtgcgggtatcgattggctgcaagcagctttaccatgaccgcgag
gaagtcacttgccacctgcgcaggctggatgtggccaaagcggcccgcaagtga
DBGET
integrated database retrieval system
