Pseudomonas syringae pv. tomato DC3000: PSPTO_3100
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Entry
PSPTO_3100 CDS
T00118
Symbol
saxF
Name
(GenBank) aliphatic isothiocyanate resistance protein SaxF; AcrB/AcrD/AcrF family
KO
K18299
multidrug efflux pump
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Module
pst_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_3100 (saxF)
01504 Antimicrobial resistance genes [BR:
pst01504
]
PSPTO_3100 (saxF)
Transporters [BR:
pst02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PSPTO_3100 (saxF)
Antimicrobial resistance genes [BR:
pst01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
PSPTO_3100 (saxF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AAO56587
UniProt:
Q880Q4
LinkDB
All DBs
Position
3484393..3487584
Genome browser
AA seq
1063 aa
AA seq
DB search
MNFSKFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRASFPGANPKVIG
ETVASPLEQAITGVEGMLYMSSQATADGKLTLTITFALGTELDNAQVQVQNRVTRTEPKL
PEEVTRIGITVDKASPDLTMVVHLTSPDQRYDMLYLSNYAVLNIKDELARLGGVGDVQLF
GMGDYSLRVWLDPNKTASRNLTATDVVNAIREQNRQVAAGQLGSPPSPNATSFQMSINTQ
GRLVSEEEFENVVVRAGPDGEITRLKDVARIELGSSQYALRSLLNNQPAVAMPIFQRPGS
NAIDISNDVRARMAELKKGFPEGMDYSIVYDPTIFVRGSIEAVIHTLFEALILVVLVVVL
FLQTWRASIIPLVAVPVSLIGTFAVMHMFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
RNIELGLEPVEATHKAMAEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAIST
VISAFNSLTLSPALAAVLLKAHDAPKDRFSRFLDKILGGWLFRPFNRFFEKASHGYVGTV
ARVIRSSGIALLVYAGLMVLTWLGFASTPTGFVPSQDKQYLVAFAQLPDAASLDRTEDVI
KRMSELALKQPGVENAIAFPGLSINGFTNSPNNGVVFVALKPFDERKDPSLSANAIAGAL
NGQFASIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLGYDELYKETQNIITKSRSVPE
LAGLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQVYLGSLYANDFNRFGRTYQVN
VQAEQQFRQDADQIGQLKVRNNLGEMIPLATFVKVSDTAGPDRVMHYNGFITAEINGAAA
PGFSSGQAQTAVEKLLREELPNGMVYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ
YESWSLPLAVILIVPMTLLSAIAGVIIAGSDNNIFTQIGLIVLVGLACKNAILIVEFAKD
KQAEGMSPLDAVLEACRLRLRPILMTSFAFIMGVVPLVLSSGAGAEMRHAMGVAVFSGML
GVTFFGLLLTPVFYVLIRNYVGRQEARKAAKAQKLQNLPAEMH
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctccaaattctttatttcacggccgatcttcgccgcagtgctgtcgctgctg
atcctgatcgccggtgcaatctcgctgttccagttgccgatcagtgaatacccggaagtc
gtgccgccgaccgtagtggtacgcgccagcttccccggcgccaaccccaaggtgatcggc
gaaaccgtcgcttcgccgctggaacaggccatcaccggtgtcgagggcatgctctacatg
tcgtcccaggccaccgccgacggcaaactgaccctgaccatcacctttgcgctgggcacc
gagctggacaacgctcaagtgcaggtgcagaaccgcgtgacacggaccgagcccaagctg
cccgaggaagtcacgcgtatcggcattaccgtggacaaggcctctcccgacctgaccatg
gttgttcacttgacctcgccggaccagcgctacgacatgctgtacctgtccaactacgcc
gtgctcaacatcaaggatgagctggcgcgactgggcggtgtcggtgatgtgcagttgttc
ggcatgggcgactactcgctgcgtgtctggctcgatccgaacaagaccgcctcacgcaac
ctgaccgccaccgacgtggtcaacgcaattcgcgaacaaaaccgtcaggtcgccgccggc
cagttgggctcgccgccttcgccgaatgccaccagttttcagatgtcgatcaacacccag
ggccgtctggtcagtgaggaagagtttgaaaacgtcgtggtccgcgccgggccagacgga
gaaattacccgcctgaaggacgtcgcacgtatcgagctgggttccagtcagtacgccctg
cgctcgctgctcaataaccagcctgccgtggcaatgccgatctttcagcgcccaggctcc
aacgccatcgacatttccaacgatgtgcgggcacggatggccgagctgaaaaaaggcttc
cccgaaggcatggactacagcatcgtctatgacccgaccatctttgtgcgcggctccatc
gaggcggtgatccatacactgttcgaagcactgattctggtggtgctggtggtggtgctg
ttcctgcagacctggcgcgcctcgatcatcccgctggtggctgtaccggtgtcactgatc
ggcaccttcgctgtgatgcacatgttcggcttctcgctgaacgcgctgtctttgttcggc
ctggtactggccatcggcatcgtggtagacgacgcgattgtggtggtcgagaacgtcgaa
cgtaacatcgagctggggcttgaaccggtcgaggcgacgcacaaggccatggctgaagtg
acggggccgatcattgccacggcgctggtgttgtgcgcggtgtttgtaccggcagcgttt
atttctggccttaccgggcagttttataaacagttcgcactgaccattgccatctcgacg
gtcatctcggcgttcaactcgctgaccctgtcgccggcgctggccgcggtattgcttaaa
gctcacgatgcacccaaggatcgcttctcgcgtttcctcgataaaatactcggaggctgg
ctgttccgcccgttcaaccgcttctttgaaaaagccagccacggctatgtgggcaccgtc
gcacgggtcattcgcagcagcggcatcgcgttgctggtctatgcggggctgatggttctg
acctggctgggcttcgccagcacgccaaccggttttgtgccaagccaggacaagcaatat
ctggtggcatttgcccagttgccggacgccgcgagcctggaccgcaccgaggacgtgatc
aagcgcatgtcggagctggcactcaagcagcccggtgtggaaaacgcgattgccttcccg
ggtctgtcgatcaacggcttcaccaacagcccgaacaacggcgtggtattcgtcgccctc
aagcctttcgatgaacgcaaggacccaagcctgtcggccaacgccatcgccggtgccctg
aacggccagtttgcgtcgattcaggaagcctacatggcgatcttcccgccaccgccggta
caagggctgggcaccattggcggcttccgcttgcagatcgaagaccgtggcaacctgggt
tacgacgagctgtacaaggaaacccagaacatcatcaccaaaagccgcagcgtgccggaa
ctggccgggttgttcaccagctacacagtgaacgtgccgcaggtcgatgccgcgattgac
cgagagaaggccaagacgcatggcgtggccgtcagcgatatcttcgacaccctgcaggtg
tacctgggctcgctgtatgccaacgacttcaaccgtttcggccgcacttatcaggtcaac
gtccaggctgagcagcagttccgtcaggatgccgatcagatcggtcagctcaaggtgcgc
aacaatctgggagaaatgataccgctggcaaccttcgtcaaggtcagtgacaccgcaggt
cccgaccgcgtgatgcactacaacggtttcattaccgccgagatcaacggcgcagccgca
ccgggcttcagctctggccaggcgcagaccgcggtggaaaagctgctgcgtgaagaactg
cccaacggcatggtctacgaatggaccgacctgacctatcagcagattctctcgggcaac
accgcgctgttcgtcttcccgctctgcgtgttgctggcgttcctggtgctggccgctcag
tacgaaagctggagcctgccgctggcggtgatcctgatcgtaccgatgaccctgctctcg
gccattgccggggtgatcattgccggtagcgacaacaacatcttcacccagatcggcctg
atcgtactggtggggcttgcgtgcaagaacgcgattctgatcgtcgagttcgccaaggac
aaacaggccgagggcatgagcccgctggatgcagtgctggaagcctgccgcctgcgtctg
cgtccgatcctgatgacctcgtttgccttcatcatgggtgtggtgccactggtactttcc
agcggtgccggtgccgagatgcgtcacgcgatgggggtcgcggtgttctccgggatgctc
ggcgtcaccttcttcggcttgctgctgacgccggtgttctacgtgctgatccgtaactac
gttggacgtcaagaggcccgcaaggccgccaaggcgcaaaaactgcaaaacctgcctgcg
gagatgcattga
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