Pseudomonas syringae pv. tomato DC3000: PSPTO_3969
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Entry
PSPTO_3969 CDS
T00118
Name
(GenBank) radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00790
Folate biosynthesis
pst01100
Metabolic pathways
Module
pst_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
PSPTO_3969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pst03016
]
PSPTO_3969
Enzymes [BR:
pst01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
PSPTO_3969
Transfer RNA biogenesis [BR:
pst03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PSPTO_3969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AAO57428
UniProt:
Q87Y43
LinkDB
All DBs
Position
complement(4477264..4477911)
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AA seq
215 aa
AA seq
DB search
MQETLRITEIFHSLQGETRTAGLPTVFVRLTGCPLRCQYCDSAYAFSGGTIQTLDDIVGQ
VASYRPRYVCVTGGEPLAQPNAIPLLKRLCDAGYEVSLETSGALDISAVDPRVSRVVDLK
TPGSKEVARNRYENMALLTPNDQVKFVICSREDYDWAVSKLIQYGLDRRAGEVLFSASHH
ELKGRDLADWIVADNLPVRLQMQLHKILWDDEPGR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaacattacgcatcaccgaaatctttcactcgttgcagggtgaaacccgtacg
gctggcctgcccaccgtgtttgtccgcctgaccggctgcccattgcgctgtcagtactgc
gacagtgcctacgcgttcagtggcggcaccattcagacgctggatgacatcgtcgggcaa
gtcgcgtcctatcgtccccgctacgtctgtgtcaccggtggcgagccgcttgcccagccc
aacgccattccattgctcaagcgtctttgtgatgcgggctatgaagtgtcgctggagacc
agtggtgcattggatatctcggcagtggaccctcgtgtcagccgcgtcgtcgatctcaag
accccggggtcgaaggaagtcgcacgcaaccgctacgaaaacatggcgttgctgacgccg
aacgatcaggtcaagttcgtgatttgctcgcgcgaggattatgactgggcggtttccaag
ctgatccagtacggcctcgatcggcgtgcgggtgaggtgctgttctcggccagccatcac
gagcttaaaggccgcgacctggcagactggatagtggccgacaatttgccggtacgcttg
cagatgcagttgcataaaattctttgggatgacgagccggggcgctga
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