Pseudomonas syringae pv. tomato DC3000: PSPTO_4402
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Entry
PSPTO_4402 CDS
T00118
Symbol
lpxC
Name
(GenBank) UDP-3-0-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00540
Lipopolysaccharide biosynthesis
pst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PSPTO_4402 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pst01005
]
PSPTO_4402 (lpxC)
Enzymes [BR:
pst01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
PSPTO_4402 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pst01005
]
Lipid A
PSPTO_4402 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AAO57851
UniProt:
Q87WZ1
LinkDB
All DBs
Position
complement(4968298..4969209)
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AA seq
303 aa
AA seq
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MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVNTGIVFCRADLDPVVQIPARAENVGDT
TLSTTLVNGDVKVDTVEHLLSAMAGLGIDNAYVELSASEVPIMDGSAGPFVFLIQSAGLE
EQDAPKKFIRILREVTVEEGGKRATFVPFEGFKVSFEIDFDHPVFRDRTQSASVDFSSTS
FVKEVSRARTFGFMSDIEYLRKHNLALGGSVENAIVVDKDGVLNEDGLRYEDEFVKHKIL
DAIGDLYLLGNSLIGEFRGFKSGHALNNRLLRALIEQTDAWEVVTFEDASTAPISYMRPV
AAV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacaacgcaccctgaaaaatattatccgtgccacaggtgtaggcctgcactcc
ggggagaaggtttacctgaccctcaagcccgcacctgtgaataccggcattgtgttttgc
cgagctgaccttgaccccgtcgtgcagatccctgcgcgtgcggaaaacgtcggcgacacc
actctgtcgaccactctggtcaatggtgatgtcaaagttgatacggtagaacacctgctc
tcggccatggctggccttggcatcgataacgcctacgtcgagctctctgcctccgaagtt
cctatcatggacggcagcgcaggccctttcgtattcctgattcaatcggcaggcctggaa
gaacaggacgcgccgaagaaattcatccgtatcctgcgtgaagtcacagtggaagagggc
ggtaaacgcgctactttcgtgcctttcgaagggttcaaggtcagtttcgagatcgatttc
gatcaccccgtcttccgtgaccgcacccagagtgcaagcgtggacttttccagcacttcc
tttgtgaaggaagtcagccgtgcccggaccttcgggttcatgagtgatatcgagtacctg
cgcaagcacaacctcgcactcggcggcagtgtggaaaacgccatcgtggtcgacaaggac
ggtgtactgaacgaagacggcctgcgttacgaggacgaattcgtcaaacacaaaatcctc
gatgctatcggtgacctctacctgctgggcaatagcctgatcggtgagttccggggcttc
aaatcggggcatgcactgaacaatcgtctcctgcgcgccttgatcgagcagacagacgcc
tgggaagtcgtgaccttcgaggatgccagtacggcacctatttcttacatgcgtcctgtc
gcggccgtgtaa
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