Peredibacter starrii: SOO65_12800
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Entry
SOO65_12800 CDS
T09598
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psti
Peredibacter starrii
Pathway
psti01501
beta-Lactam resistance
psti01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SOO65_12800
01503 Cationic antimicrobial peptide (CAMP) resistance
SOO65_12800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psti02000
]
SOO65_12800
01504 Antimicrobial resistance genes [BR:
psti01504
]
SOO65_12800
Transporters [BR:
psti02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOO65_12800
Antimicrobial resistance genes [BR:
psti01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SOO65_12800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
ABC_membrane
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WPU63568
UniProt:
A0AAX4HK08
LinkDB
All DBs
Position
2517866..2521030
Genome browser
AA seq
1054 aa
AA seq
DB search
MFAKFVHRPVFAIVISVIIVFIGILSIKSLPVSQFPDVAPPRVVVTLSFPGSSADVLVKS
SIITLEQAINGVQGMRYITSASTSAGEAMIQVYFNLGTDPNAALVQVKARVDQVMSKLPS
LVQLEGVVVQPVQPSMLMYVNLYSTDKNADEKFLFNYSNVFLLPELKRITGIGQARILGS
RQYAMRIWLNPDRMRAYGVSTADVMEAIKEQSLIARPGRTGQSSGKTAQSLEYVLVYEGQ
YNKPEQYENVIIRANPDGEVLYLKDIAKIELNSEFYNIYSNVDGYPAASIMFRQTAGSNA
SEVIAEIKGKLNELKKSFPPGMDYKITYDVSSFLDASIDKVIHTLFEAFVLVALVVFIFL
GDWRSTLIPTIAVPVSLIGAFFFMKSFGLTINLITLFALVLAIGVVVDDAIVVVEAVHAK
MAEEHLSPFAAVKEVLGEISGAVIAITFLMTAVFVPVAFMPGPVGVFYREFSVTMACSIV
LSGVVALTLTPVLSAMILKPHDHSGHKSINPITKMINAFNVVFEKITDKYISFLKRITHN
RFVTLLVIGGFTAGIVLISALVPPGFVPNEDQGMLYAIIQTPPGSTIEKTNDVAMKLQKV
AKSIEGVDSVASLAGYEILTEGQGSNAGTCLISLKDWSKRKHSVHEIVEELEEKTRDFGA
VIEYFEPPAVPGYGAAGGISLRMLDKTGSGDYQKFDEINKEFMANLKKRKELTGVFTFFS
ANFPQYELKLDRKVAMQKGVSIGKAMEDLNILVGSTYEQGFIRFGQFFKVYAQAAPEFRR
LPTDILNLYTKNDKGEMVPYSSFVTMEKTQGPNEITRYNVYMSSAINALPNNGFTTGDAI
SAVKEEAKNLPHGYEVAWEGLTYDEAARGSEAVYIFLVVLIFVYLVLSAQYESFIIPLAV
ILSLPPGLFGSFFLLKAMGLANDIYAQIGLIMLVGLLGKNAVLIVEFAKQKQEQGMSVLD
AAIEGAKARFRPILMTSFAFIAGLIPLVIATGPGAKANHTIGACALGGMLFGTIFGVIIV
PGLYYVFGSIAAGKTLIKEEDDRPLTEEGHHYVN
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaaatttgtacatagacctgtatttgcgatagtgatctcggtcatcatcgta
ttcataggtattctttccattaaatctttacccgtctcccaattcccagatgtggcccct
ccgcgtgttgtggttacactctccttcccaggttctagtgccgacgttcttgttaagtcg
tctatcattacccttgaacaggcgatcaacggtgtacaagggatgagatatatcacgtcc
gcttcaaccagtgctggcgaggcgatgattcaggtgtacttcaatcttgggaccgatccg
aatgcggccctggtccaggttaaagcgagagttgatcaagtaatgagtaagcttccatct
ctggtgcaactagaaggagtggtagtgcaaccagttcagccttcgatgctcatgtacgta
aacctttatagtactgacaagaatgcagatgagaagtttctctttaactactctaacgtt
ttccttcttcctgagttaaaacgtattactggtatcggtcaggcccgtattcttggttct
cgccaatacgccatgagaatttggcttaatcctgatcgcatgcgtgcttacggggtttct
actgctgatgtgatggaagcgattaaggagcaaagtttgatcgctcgtccgggtcgaacc
ggtcaaagttccggcaagacagcgcagtcacttgaatacgttctcgtttatgaaggtcag
tacaataaacccgagcaatatgaaaatgtcatcattcgggccaatcccgatggtgaagtt
ctctatttgaaggacattgcgaagattgaacttaatagtgagttctataacatctattcg
aacgtagatggttatccagctgcctccattatgttccgtcaaacggcgggaagtaatgcc
agtgaggtaattgccgagattaaaggaaaactaaatgagctgaaaaaatccttcccacca
ggaatggattacaaaattacctatgacgtatcaagcttccttgatgcttccattgataaa
gttattcataccctttttgaggccttcgttctggttgccctggtggtgtttatcttcctt
ggagactggaggtcgactctcattccaaccattgcagttccggtgtctctcatcggggca
tttttctttatgaagtcttttggactgacgattaacctcatcaccctgttcgcacttgtg
ctcgccattggggtagtggtggatgatgcaatcgtagtggttgaagcagttcacgccaaa
atggcagaagagcatctctcaccttttgcagcggttaaagaagtgttgggcgaaattagt
ggtgcggttatcgctattactttcctcatgactgcggtgttcgtaccagttgcctttatg
ccaggacctgtaggtgtgttttatcgagagttctcagtaacaatggcctgttcaattgtg
ctttcaggtgtggttgctctcacacttacgccagtactctccgccatgattctaaagcca
catgatcatagtggacacaaatcgattaatcctatcactaagatgattaatgcttttaac
gtggtctttgagaaaatcactgacaagtatattagttttcttaaacgtatcactcacaac
cgttttgtcacactccttgtaatcggtggtttcacggccgggattgttctcatcagtgca
cttgttcctcctgggtttgttcctaacgaagaccaaggtatgctttatgccatcattcaa
actcctcctggttcaactattgagaagaccaatgatgtggcgatgaaacttcaaaaagtg
gccaaatccatcgaaggtgtggattccgtggcctcgctcgcgggttacgaaattctgact
gaaggtcagggctcaaacgctggtacctgtcttatcagtttaaaagactggtctaagaga
aagcattccgttcatgaaatcgtggaagaactggaagagaagactcgtgactttggtgcg
gtaattgaatacttcgaaccacctgccgttccgggttacggtgcggccggcggtatttcg
ctacgaatgctagataaaaccggtagtggtgattatcagaaattcgatgagattaataaa
gagttcatggccaatctcaaaaaaagaaaagagctcactggtgtgttcaccttcttctca
gctaacttccctcagtatgagcttaaactcgatcgtaaagtggccatgcaaaaaggtgtt
tcaatcggtaaagcgatggaagacctgaacattctggttggttcaacttatgaacagggt
ttcattcgattcggccaattctttaaagtgtatgctcaagcggcccctgagttcagacgt
cttcccactgatatcttaaacctttataccaaaaacgataaaggcgagatggttccctac
tcttcatttgtgacaatggagaagacccaaggtccaaacgagatcactcgttacaacgtg
tatatgtcgagtgccatcaacgcgcttcctaataatggtttcaccacaggtgatgctatt
agcgcagttaaagaagaggccaaaaatcttccacacggatatgaagtcgcctgggaaggt
ttgacttatgatgaagcggcccgaggaagtgaggccgtatacatcttcctagttgtgttg
atcttcgtgtacctggtgctttctgctcagtatgaaagtttcatcattccattggcggtg
attttgtcccttcctcctggattgtttggatcattcttcctcttgaaggccatggggctg
gcgaatgatatttacgctcagatcggtctcatcatgctggtgggtctacttggtaaaaac
gcggttcttattgttgagttcgcaaaacaaaagcaagaacagggcatgagcgttctagat
gcggccatcgaaggggccaaagctcgtttccgtccgattcttatgacttcgtttgctttt
atcgctggtcttattccacttgtgattgcaactggtccgggagcaaaggccaaccataca
attggtgcttgtgctttaggaggaatgctttttggaacaatcttcggtgtgatcattgtt
cctggtctttactatgtctttggttcaattgctgcgggcaagaccctcatcaaagaagaa
gatgatagacctttaactgaagaaggacatcattatgttaactaa
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