Plautia stali symbiont: E05_25450
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Entry
E05_25450 CDS
T03051
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
psts
Plautia stali symbiont
Pathway
psts03030
DNA replication
psts03410
Base excision repair
psts03420
Nucleotide excision repair
psts03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E05_25450
03410 Base excision repair
E05_25450
03420 Nucleotide excision repair
E05_25450
03430 Mismatch repair
E05_25450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psts03032
]
E05_25450
03400 DNA repair and recombination proteins [BR:
psts03400
]
E05_25450
Enzymes [BR:
psts01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
E05_25450
DNA replication proteins [BR:
psts03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E05_25450
DNA repair and recombination proteins [BR:
psts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
E05_25450
NER (nucleotide excision repair)
GGR (global genome repair) factors
E05_25450
MMR (mismatch excision repair)
DNA ligase
E05_25450
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E05_25450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
DUF4874
HHH
5_3_exonuc
DZR_2
Motif
Other DBs
NCBI-ProteinID:
BAN97311
UniProt:
U3TZ98
LinkDB
All DBs
Position
complement(2056399..2058417)
Genome browser
AA seq
672 aa
AA seq
DB search
MTSVQEQITALRTTLRHHEYLYHVMDTPEIPDAEYDRLMRELRELESAHPDLITPDSPTQ
RVGAAPLATFEQVRHEVPMLSLDNTFDEAGFLAFNKRMQDRLKSTDNLTYCCELKLDGLA
VSLLYENGLLVRAATRGDGTTGENITANVRTIHAIPLRLHGDNIPARVEVRGEVFMTESG
FEKLNEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGFGLLEGGEMPASHW
QRLQQFKAWGLPVSDRIRLVHTADEVLAFYRQVEQDRPSLGFDIDGVVIKVDSQALQEQL
GFVARAPRWAVAFKFPAQEQMTVVRDVEFQVGRTGAITPVARLEPVQVAGVIVSNATLHN
ADEIARLGLRIGDKVVIRRAGDVIPQVVNVVESERPADAREIVFPSHCPVCGSDVESVEG
EAVTRCTGGLICGAQRKEALKHFVSHRAMDVDGMGDKIIDQLVEKEYVKTPADLFRLTAG
KLTGLDRMGPKSAQNVVDALEKAKLTTLPRFLYALGIREVGEATAANLANHFGELEKVMN
ADLDALIAVQDVGKVVAAHVRNFMEEESNREVIRQLTDEVGVHWPAVVVVKAEEIDSPFA
GKTVVLTGSLSQMNRDDAKARLTALGAKVSGSVSKKTDLLIAGEAAGSKLAKAQELGIEV
IDEAEMIRLLGA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggttcaggagcagatcaccgcgctgcgcaccacgttacgccaccacgaatac
ctctatcacgtgatggatacgccggaaatcccggatgcagaatatgaccgattgatgcgc
gaactgcgtgagctggagagcgcgcatcccgatttaatcaccccggattctcccactcag
cgcgtgggcgcggcaccgcttgccacctttgaacaggtgcgccatgaagtgccgatgctg
tcgctcgataacacctttgatgaagccggatttcttgccttcaataagcgcatgcaggat
cgcctaaaaagcactgacaatctcacctattgctgcgagctgaagctggatggtctggcg
gtaagtttactgtatgaaaacggcctgctggtgcgtgccgccacgcgcggcgatggcacc
accggcgaaaacatcacggcaaacgtgcgcaccattcacgccattccgctgcgcctgcac
ggcgacaatattccggcgcgggtagaagtgcgcggcgaagtatttatgaccgaaagtggc
tttgagaagctgaatgaggaagcgcgacgtaccggcggcaaagtgtttgccaacccgcgt
aatgcggcggccggctcgctgcgccagctcgatccgcgtatcaccgcgaaacgtccgctg
accttcttctgctacggctttggcctgctagagggcggcgaaatgcctgccagccactgg
cagcgtctgcaacagtttaaggcctggggattaccggtcagcgaccggattcgcttggtg
cacaccgcggatgaagtactggcattttatcgtcaggttgagcaggaccgtccgtcactc
ggctttgatattgacggcgtggtgatcaaagtcgactcgcaggcgctgcaggagcagctg
ggctttgtagcccgcgcaccgcgctgggcggtggcattcaagttcccggcgcaggagcag
atgacggtggtgcgcgacgttgagtttcaggtcggacgtaccggggcgattacgccggtg
gcgcgcctcgaaccagtgcaggtcgcgggcgtaatagtcagtaatgcgacgctgcataac
gccgatgaaatcgcccggctggggctgcgtatcggcgacaaagtggtgattcgtcgcgcc
ggtgacgtgattccgcaggtggtcaacgtggtggaatccgagcgtccggcggatgcgcgc
gagattgtgttccccagccactgtccggtttgcggttctgacgtagagagtgtggaaggc
gaagccgtaacgcgctgtaccggcgggctgatttgcggagcgcagcgtaaagaggcgcta
aagcactttgtctcacaccgtgcgatggacgtggacggcatgggcgataaaattatcgat
cagctggtggaaaaagagtacgtcaaaaccccggccgacctgttccgtctcaccgctggc
aagctgaccggactggatcgcatggggcccaaatcggcgcaaaacgtggtggacgcgctg
gaaaaagccaaactcaccacgctgccgcgcttcctgtatgcgctcggcatccgcgaagtg
ggcgaggcaacggcggccaacctggcgaaccattttggcgagctggaaaaggtcatgaac
gccgatctcgatgcgctgatcgcggtacaggacgtcggcaaagtagtggcagcgcacgtg
cgcaacttcatggaagaggagagcaaccgcgaagtgatccgccagctgacggatgaggtg
ggcgtgcactggccggcggtggtggtggtcaaagccgaagagattgacagcccgttcgcc
ggtaaaactgtggtactgacgggctcgctgtcgcagatgaaccgtgacgatgccaaagcg
cggctgacggcgctgggggccaaagtcagcggtagcgtatcgaaaaaaaccgatttgctg
atcgccggtgaggccgccggttccaagctggcaaaagcgcaggagctggggattgaggtg
atcgatgaagccgagatgattcggttactgggcgcctga
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