Stutzerimonas stutzeri 28a24: CH92_08715 Help Entry CH92_08715        CDS       T03390                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pstt  Stutzerimonas stutzeri 28a24 Pathway pstt03030   DNA replication pstt03410   Base excision repair pstt03420   Nucleotide excision repair pstt03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pstt00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CH92_08715    03410 Base excision repair     CH92_08715    03420 Nucleotide excision repair     CH92_08715    03430 Mismatch repair     CH92_08715  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pstt03032]     CH92_08715    03400 DNA repair and recombination proteins [BR:pstt03400]     CH92_08715 Enzymes [BR:pstt01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CH92_08715 DNA replication proteins [BR:pstt03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CH92_08715 DNA repair and recombination proteins [BR:pstt03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CH92_08715    NER (nucleotide excision repair)     GGR (global genome repair) factors      CH92_08715    MMR (mismatch excision repair)     DNA ligase      CH92_08715   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CH92_08715 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT Bep_C_terminal RUBY_RBDX Motif Other DBs NCBI-ProteinID:  AHL75188 UniProt:  W8R6J8 LinkDB All DBs Position 1828975..1831341 Genome browser AA seq 788 aa AA seqDB search MPSAQTAAERIAELRSEIDAHNYRYYVLDEPSVPDAEYDRLFKELRTLEGEHPELVTPDS PTQRVGGAALAAFGQIRHEVPMLSLGNAFEEQDLIDFDRRAREGLDLPAGDLLGDGVELE YSCEPKLDGLAVSLLYENGNLVRGATRGDGSTGEDISANVRTIRNIPLKLRGTGWPAVLE VRGEIYMPKAGFEGLNARQLEAGGKPFANPRNAAAGSLRQLDSKITASRPLELCAYGVGR SDGDLPDTHIGILEALKSWGLPISRELKLAKGVKECRDYFHAIGEKRDALPYEIDGVVFK VNSTAQQRELGFRAREPRWAIAHKFPAREEVTELLDVEFQVGRTGAITPVARLKPVQVAG VTVSNATLHNMDEVARLGVMIGDTVIVRRAGDVIPQILGVIPERRPEHAREVHVPEQCPV CGSAVERTQLIKRSKGRESISEGSIYRCVGRLACQAQLKQAIIHFVSRRAMDIDGLGDKI VEQLVDTGLVGSPADLYCLTFEQVLALEGFAEVSSRNLLKAIDASRTPSLARFIFALGIS DVGEGTAKLLARALGSLDRISRAMPDVLVYLPDIGLEVAHEIHSFFEDEHNQLVIQQLRE RGVQLQEEGEVHSEFAACATLAGLLDKLNIPFIASTGAQRLADRFGSLDGIIGADWLDLR QVERLNEKAARALRDYFDDPANAERARTIEAQLREFGMHWQSERKAAQGLPLAGQTWVLT GTLESMSRDEAKARLEALGAKVSGSVSAKTSVVVAGPGAGSKLTKANELGVEVADEESFL QRLATLEA NT seq 2367 nt NT seq  +upstreamnt  +downstreamnt atgccttccgctcaaaccgccgccgagcgcatcgccgaactgcgcagtgaaatcgacgcc cacaactaccgttactacgtgctcgacgagcccagcgtccccgacgcggagtatgaccgc ttgttcaaagagctcaggacgcttgagggcgagcatcctgagttggttactccggactcg ccaactcagcgggtcggcggcgcggcgttggcggccttcggccagatccgccatgaagtg ccgatgctgagcctgggcaatgccttcgaagagcaggacctgatcgatttcgaccggcgc gctcgcgaagggctggatctgccagccggcgatcttctcggcgacggtgtcgagctggag tacagctgtgagccgaagctcgacggtttagccgtaagcctgctttacgagaatggcaat ctggtgcgcggcgcaacccgcggtgacggcagcaccggcgaagacatcagcgccaatgtg cgcaccattcgcaatattcctttgaaactgcggggcaccggctggccagccgtgttggaa gtgcgaggcgaaatctatatgcccaaggcgggcttcgaggggctcaatgcgcgtcagttg gaggcgggcggcaagccattcgccaacccgcgcaacgcggcagctggcagcctgcgccag ctggattcaaagattaccgccagccgtccgctagagctgtgtgcctatggcgtcggccgc agcgatggtgacctgccggacacccacatcggtatcctcgaggcgctgaaaagctggggc ttaccaatcagccgggagctcaaactggccaagggtgtaaaggaatgtcgcgactacttt catgccatcggcgagaagcgcgacgcattgccttatgaaatcgacggcgtggtgttcaaa gtcaactcgaccgcccagcagcgcgagctgggcttccgcgctcgcgaaccgcgctgggcc attgcgcataagtttcccgcccgtgaggaagtcaccgagctgctcgatgtggaattccaa gttggtcgaaccggcgccatcacgcccgtcgcgcggctgaagcccgtacaggtcgccggc gtgacggtttccaacgccacgctgcacaacatggacgaggttgcacgcctgggtgtgatg atcggggacacggtcattgtgcggcgcgccggagacgtcattccacagattctcggggtt atcccggagcgccgtcccgagcatgcacgtgaagtccatgtgcctgaacaatgcccggta tgcggctctgccgtagagcgcacccagctaatcaaacgcagcaagggcagggaatcgatc agcgagggctctatctatcgttgtgtcggccgcctggcctgtcaggcgcagctcaagcag gcgatcatccacttcgtctcgcgccgtgcgatggatattgacggcctgggggacaagatc gtcgaacagctcgtggataccggactggtcggctcgccagccgatctgtactgcctgacc ttcgagcaggtgttggcgctcgaaggcttcgccgaggtgtcgagccgcaacctgctcaaa gccatcgatgccagtcgtacgccgtccctggcacgcttcatctttgccttgggaatttcg gatgtcggcgagggcactgccaagctgctggcgcgtgctctgggatcgctcgatcgcatc agtcgagcgatgccggacgtgctggtctatctgccggatatcggtctggaagtcgcccac gaaatccacagcttcttcgaggacgagcataaccagttagtcatccagcagctccgcgag cgcggcgtgcagttgcaggaggagggcgaggtgcattccgagttcgcggcttgcgcaaca ttagccgggctgctcgacaaactgaatattcccttcatcgccagtacgggcgcccaacgt ctggctgatcgcttcggcagcctcgatggcatcatcggagccgactggctggatttgcgt caggtcgagcgcctcaacgagaaggcggctcgcgccttgcgcgactatttcgacgacccg gccaacgccgagcgcgcccgcactatcgaagcccaactacgtgagttcgggatgcattgg caaagcgaacggaaggcggcgcaaggactccctttggcgggccagacctgggtgctcacc ggcaccctggaaagcatgagccgcgacgaggccaaggccaggttggaagcgttgggggcg aaagtatcgggttcagtctcagccaagactagcgtggtggtcgcggggcccggtgcgggt tcgaaactgacgaaggccaacgaactgggcgtcgaagtagctgacgaagagtccttcctg caacgactcgctaccctcgaagcctag

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