Pantoea stewartii subsp. stewartii: DSJ_09360
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Entry
DSJ_09360 CDS
T04970
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pstw03009
]
DSJ_09360 (rumB)
Enzymes [BR:
pstw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
DSJ_09360 (rumB)
Ribosome biogenesis [BR:
pstw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DSJ_09360 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ARF49525
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Position
1916885..1918030
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AA seq
381 aa
AA seq
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MQCALYDANRCRSCQWLEKPYSQQLDEKQSLLAQLLADVPVATWLPPVASAQEGFRNKAK
MVVSGSVERPVFGIVQRNGEAVDLSDCPLYPDRFSPVLATLKPFIARAGLTPYNIERQRG
ELKYLLLTESTQGGMMLRFVLRSHTKLAQLRAALPWLQQQLPQLTVISANIQPVHMAILE
GEEEIPLTPTQSLAETFNGVPLWIRPQSFFQTNPQVASALYATARDWVRALPVTSMWDLF
CGVGGFGLHCASPSLQLTGIEISAEAIRCAERSADTLGLDNVSFAALDSTAFALGREAVP
QLVLVNPPRRGIGRELCEYLRAMAPDYVLYSSCNAQTMAQDIARLSDYRVTQVQLFDMFP
HTAHYEVLTLLTHQRQGGPAR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgcgcgctctatgacgctaaccgctgccgctcatgccagtggctcgaaaaaccc
tattcacagcagcttgatgaaaaacagtctctgctggcccaactgctggctgatgttccg
gttgcaacctggctgccgccggtcgcctcggcccaggaagggtttcgtaataaagcgaag
atggtggtcagtggaagtgtagagcggcctgtttttggcatcgtgcagcgcaacggcgag
gccgtcgatctgtcggactgtccgctttaccctgaccgtttttcaccagtgctggcaacc
ttaaaaccgtttatcgcgcgcgcggggttaacgccatacaacattgaacgccagcgcggt
gagctgaagtatctgctgctgacggaaagcacgcagggcggcatgatgctgcgctttgtt
ctgcgctcgcacacgaagctggcacaactgcgagctgcgctgccctggcttcagcaacag
ctgccgcaactgacggtgatctccgccaatatccagccggttcatatggccattctggaa
ggggaggaggagattccgttaacgccgacccagtcgctggcagaaacgttcaatggggtg
cccttgtggatccgccctcagagttttttccagaccaatcctcaggtcgctagtgcgctg
tatgccacggcgcgcgactgggtccgtgcgctcccggtaaccagcatgtgggatctgttc
tgcggggtgggcggatttggcctgcattgcgcgtcgccgtccctgcagcttaccgggatt
gaaatcagcgccgaagcgattcgctgtgcagaacgctctgccgatacgctgggcctggat
aatgtcagttttgccgcgctggattccaccgcgtttgcattgggacgcgaagcggtgccg
cagctggtgctggtcaatccaccgcgtcgggggattggccgtgagttgtgtgagtatctc
cgtgcgatggcaccggattatgtactttattcaagctgtaatgcacagaccatggcgcag
gatatcgcccggctcagtgactacagggtaacgcaggtccagctgtttgatatgttcccg
cacaccgcgcattatgaggtgctgacgctgttgacgcatcaacgtcagggcgggccagcc
aggtaa
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