Pseudomonas cremoricolorata: LK03_20200 Help Entry LK03_20200        CDS       T03354                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism psw  Pseudomonas cremoricolorata Pathway psw03030   DNA replication psw03410   Base excision repair psw03420   Nucleotide excision repair psw03430   Mismatch repair Brite KEGG Orthology (KO) [BR:psw00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     LK03_20200    03410 Base excision repair     LK03_20200    03420 Nucleotide excision repair     LK03_20200    03430 Mismatch repair     LK03_20200  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:psw03032]     LK03_20200    03400 DNA repair and recombination proteins [BR:psw03400]     LK03_20200 Enzymes [BR:psw01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      LK03_20200 DNA replication proteins [BR:psw03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      LK03_20200 DNA repair and recombination proteins [BR:psw03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      LK03_20200    NER (nucleotide excision repair)     GGR (global genome repair) factors      LK03_20200    MMR (mismatch excision repair)     DNA ligase      LK03_20200   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       LK03_20200 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD DUF4796_N PTCB-BRCT Zn_ribbon_SprT Motif Other DBs NCBI-ProteinID:  AIR91448 UniProt:  A0A089YIC2 LinkDB All DBs Position complement(4399343..4401697) Genome browser AA seq 784 aa AA seqDB search MTAEERISKLRTDLDKHNYSYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQR VGGAALAAFQQIRHEVPMLSLGNAFEEADLREFGRRVTEGLDLPSADLLGEGASVDYSCE PKLDGLAVSLLYRDGQLVQGATRGDGSTGEDISSNVRTIRNVPLKLHGRGWPQVLEVRGE VFISKAGFERLNAAQAEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVGQISKP IALSHIDTLQQLKAWGLPISRELRHAAGVEECLAYYRDIGERRNALAYEIDGVVFKVNSL ASQRELGFRAREPRWAIAHKFPALEELTEVLDVEFQVGRTGAVTPVARLRPVKVAGVTVS NATLHNMDEIARLDVHIGDTVIIRRAGDVIPQVMQVVLERRPDDARAVQIPHQCPVCGSH VERTQLVKRSKGRTTISEGAVYRCVGRLSCAAQLKQAIIHYVSRRAMDIDGIGEKSVEQL VDEGLIRSPADLYQLTFDQVVALEGFAEVSSNKLLEAIKASQKPTLARFIYALGIPDVGE ETAKVLARSLGSLARVQAALPQVLTYLPDIGLEVAHEIHNFFQDPHNQQVIEQLLASGMQ LQDEGELAAEFAASTTLAGLIAKLDIASVGPTGAEKLVAKLGSLDAIIAADGIDLRQALS AKPAEAVREFFKDPEHQQLARAIEAQLLDFGMHWSSEKKTAAGLPLAGQTWVLTGSLERM SRDIAKDHLEGLGAKVAGSVSSKTHCVVAGPGAGSKLTKANELGLKVLDEDAFITFLGEH SITL NT seq 2355 nt NT seq  +upstreamnt  +downstreamnt atgaccgccgaagaacgtatttccaagctgcgcaccgatctggataagcacaactacagc tactacgtgctcgacgagccgagcgtgcccgacgccgaatacgaccgtctgttcaacgaa ctgaaggcgctcgaggccgagcatccgcacttggttaccccggattcgccgacccagcgg gtcggcggcgcggccttggcggcgtttcagcagatccgccacgaggtgcccatgctcagt ctgggcaacgccttcgaagaggccgacctgcgtgagttcggtcgccgcgtcaccgaaggc ctcgacctgcccagcgccgacctgctcggcgagggcgcatcagtggattacagctgtgag cccaagctcgatggcttggcggtcagcctgctctaccgcgacggccagctggtgcaaggc gccacccgcggcgacggcagtaccggcgaagacatcagcagcaacgtgcgcaccatccgc aacgtgccgctcaagctgcatggccgcggctggccgcaggtgctggaagtgcgtggcgag gtgttcatcagcaaggctggcttcgagcgcctcaacgccgcccaggccgaagtcggcggc aagaccttcgccaacccgcgcaacgctgccgccggcagcctgcgccagctcgactcgaag atcaccgccagccgcccgctggagttctgctgctacggcgtcggtcagatctccaagccc atcgcccttagccatatcgacaccctgcagcagctcaaggcctggggcctgccgatcagt cgcgagctcaggcacgccgccggcgtcgaagagtgcctggcctactaccgcgacatcggt gagcgacgcaatgcgctggcctacgaaatcgatggcgtggtgttcaaggtcaacagcctg gcctcgcagcgcgaactgggctttcgtgcccgcgaaccgcgctgggccatcgcccacaag tttccggcgctcgaagagctcaccgaagtgctcgacgtcgagttccaggtgggccgcact ggcgcggtcacgccggtagcgcgcctgcgcccggtcaaagtggcaggggtcacggtgtcc aacgccaccttgcacaacatggatgaaatcgcccgcctggatgtgcacatcggcgacacg gtaatcatccgccgtgccggtgatgtcatcccgcaagtcatgcaggtggtgctcgaacgc cgcccggacgacgctcgcgcggtgcagattccccaccagtgcccggtgtgcggttcccac gtcgagcgcactcaactggtcaagcgcagcaagggcaggacgaccatcagcgaaggcgcg gtgtaccgctgcgtcggccggctgagctgcgcggcgcagctcaagcaggcgatcatccac tatgtgtcgcggcgggccatggacatcgacggcatcggcgagaagagcgtcgagcagttg gttgacgaagggctgattcgttccccggccgacctctatcagttgaccttcgaccaggta gtggcgctggaaggctttgccgaggtctcgagcaataagctgctcgaggcgatcaaggcc agccagaagccgaccctggcgcgcttcatctatgccctgggcattcccgatgtcggcgag gaaaccgccaaggtgctggcccgctcgcttgggagtctggcgcgggtgcaggcggcgctg ccgcaggtgctcacctacctgccggacatcggcctggaagtggcccacgaaatccacaac ttcttccaggacccgcacaaccagcaggtcattgaacagttgctcgccagtggtatgcag ttgcaggacgaaggcgagctggcggccgagttcgctgccagcaccacgctcgccgggctg atcgctaagctcgacatcgcctcggtcggccccaccggggcggaaaagctggtcgccaag ctcggctccctcgacgccatcatcgccgccgacggcatcgatttgcgccaggccctgtca gccaaacccgccgaggcggtacgggaattcttcaaggaccccgagcaccagcaactggcg cgcgccatcgaggcccaactgctggacttcggcatgcactggagcagcgagaaaaagacc gccgcaggcctgccactggccggccagacgtgggtgctgaccggcagcctcgagcgcatg agccgcgacatcgccaaggatcatctcgaagggcttggcgccaaggtcgcaggctcggta tcgagcaagacccactgcgtggtcgccggccccggcgccggctccaagctgaccaaggcc aatgaactgggcctgaaggtgctcgatgaagacgccttcatcaccttccttggcgagcac agcatcaccctctga

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