Pseudoliparis swirei (Mariana hadal snailfish): 130188983
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Entry
130188983 CDS
T09868
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04020
Calcium signaling pathway
pswi04510
Focal adhesion
pswi04518
Integrin signaling
pswi04540
Gap junction
pswi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130188983 (pdgfab)
04020 Calcium signaling pathway
130188983 (pdgfab)
09133 Signaling molecules and interaction
04518 Integrin signaling
130188983 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130188983 (pdgfab)
04540 Gap junction
130188983 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130188983 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130188983 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
pswi00536
]
130188983 (pdgfab)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Growth factors (RTK binding)
130188983 (pdgfab)
Glycosaminoglycan binding proteins [BR:
pswi00536
]
Heparan sulfate / Heparin
Growth factors/receptors
130188983 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
Motif
Other DBs
NCBI-GeneID:
130188983
NCBI-ProteinID:
XP_056263557
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All DBs
Position
23:complement(10993887..11012943)
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AA seq
208 aa
AA seq
DB search
MRAALCYFLLWTTYLLLATSEEVEFPQELIDRLSHSEIHSISDLQRLLDLDSVGAGNNVI
EEPKHHKHHNHQKNYSRHPGYYNDLKSSQLHSRRKRSIAEEAVPAACKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYIKRRPKLKEVFV
RLEDHLECVCSSQHHAAVHSDAETVDVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgttacttcctgctgtggacgacgtacctgctgctggccacctct
gaggaagtggagtttccccaggagctgatagacagactgtcccacagtgaaatccacagc
atcagcgacctccagcggctactggaccttgactccgtaggtgcgggaaacaatgttatc
gaggagcccaagcaccacaagcaccacaaccaccagaagaactactcccgtcatcccggt
tactacaacgacctgaagagctcccagctccacagccgacgcaagaggagcatcgcagag
gaggcggtcccggcggcgtgtaagacgcggacggtgatctacgagatccccaggagccag
gtggatcccacgtctgccaacttcctgatatggccgccctgtgtggaggtgaagcgctgc
acaggctgttgcaacacgagcaacatgcgctgtcacccatcccgcaagcaccatcgcacc
gttaaggtagcaaaggtggagtacataaagaggagacccaagctgaaagaggtctttgtg
cggttagaagaccacctggagtgtgtgtgttcgtcacagcatcatgcggcggtgcactct
gatgcagaaacagtggacgtgaggtga
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