KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130189005
Entry
130189005         CDS       T09868                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03420  Nucleotide excision repair
pswi04110  Cell cycle
pswi04114  Oocyte meiosis
pswi04120  Ubiquitin mediated proteolysis
pswi04141  Protein processing in endoplasmic reticulum
pswi04310  Wnt signaling pathway
pswi04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130189005 (rbx1)
   04120 Ubiquitin mediated proteolysis
    130189005 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130189005 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    130189005 (rbx1)
   04350 TGF-beta signaling pathway
    130189005 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    130189005 (rbx1)
   04114 Oocyte meiosis
    130189005 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pswi04121]
    130189005 (rbx1)
   03400 DNA repair and recombination proteins [BR:pswi03400]
    130189005 (rbx1)
Enzymes [BR:pswi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     130189005 (rbx1)
Ubiquitin system [BR:pswi04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   130189005 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     130189005 (rbx1)
   Cul2 complex
     130189005 (rbx1)
   Cul3 complex
     130189005 (rbx1)
   Cul4 complex
     130189005 (rbx1)
   Cul7 complex
     130189005 (rbx1)
   Cul8 complex
     130189005 (rbx1)
   Cul9 complex
     130189005 (rbx1)
DNA repair and recombination proteins [BR:pswi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      130189005 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      130189005 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 130189005
NCBI-ProteinID: XP_056263585
LinkDB
Position
23:complement(17832197..17834320)
AA seq 108 aa
MAAAMDVDTPSSTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagcgatggatgttgacacgccgagtagcacgaacagtggcgctagcaagaag
cggtttgaagtgaagaagtggaatgcagtggcgctgtgggcctgggacatcgtggtggat
aactgtgctatctgtcggaaccacatcatggacctctgtatagagtgccaggccaaccag
gcctctgcgacctctgaggagtgcactgtagcctggggagtctgcaatcatgccttccac
ttccactgtatttcccgctggctgaaaaccagacaggtgtgtcctctggacaacagggag
tgggagtttcagaaatacggacactag

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