Pseudoliparis swirei (Mariana hadal snailfish): 130189254
Help
Entry
130189254 CDS
T09868
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00514
Other types of O-glycan biosynthesis
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130189254 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130189254 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130189254 (lfng)
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
130189254 (lfng)
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
O-Glycan
130189254 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF6286
Motif
Other DBs
NCBI-GeneID:
130189254
NCBI-ProteinID:
XP_056263997
LinkDB
All DBs
Position
23:5229295..5236166
Genome browser
AA seq
375 aa
AA seq
DB search
MLSTSNKKAAVSVGSAAGLCLLLLLLAAAQHHRVQVRDDASAAGDAGGTRSLLQDAAHEV
EEEQQTKKGFSAYFTKLTRGRRDVEKPARSSSSAYGADPPPAEDIGANDVFIAVKTTKKF
HQSRLNLLLDTWISRNVQQTYIFTDGEDAELKKKIGSHAINTNCSAAHSRQALSCKMAVE
YDKFIESGKKWFCHVDDDNYVNVRTLVKHLSQYPHTQDMYIGKPSLDRPIEATERLGDNK
MKPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTVGYIIESVLGVP
LTRSNLFHSHLENLQQVSRTEIHKQITLSYGMFENKSNIINFKGAFPVEEDPSRFKSVHC
LLYPDTPWCPPQVAF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaactagtaataagaaggcggccgtctctgtgggcagcgccgcgggcctctgc
ctgctgctgctgctgctggccgccgcgcagcatcaccgcgttcaggtgcgggacgacgcg
tccgcggcgggggacgcgggcggcacgcgctctctgctccaggatgccgcgcatgaggta
gaggaggagcagcagacgaagaagggcttctcggcgtacttcaccaaactgacccgggga
cgccgcgacgtggagaagcccgcgcgctcctcctcctcggcgtacggcgccgacccgcct
ccggccgaggacatcggcgccaacgacgtcttcatcgcggtgaagaccaccaagaagttc
catcagtccagactcaatctgctcctggacacgtggatctcgagaaacgtgcaacagacg
tacatcttcacggacggggaggatgcggagctgaagaagaaaattgggagtcacgccatc
aacacaaactgctccgccgctcacagccgacaagctctctcctgcaagatggcggtggaa
tacgataagttcatcgagtcggggaaaaagtggttctgtcacgtcgatgacgacaactac
gtgaacgtgcggaccctggtgaagcacctgtcccagtacccccacacccaggacatgtac
atcgggaagcccagtctggaccggcccatcgaggccacggagaggctgggggacaacaag
atgaaacccgtcaacttctggttcgctaccggaggagccggcttctgtgtgagccgaggg
ctggcgctgaagatgagcccgtgggccagcggcggccacttcatgaacacagcggagaag
atccgtctgcccgacgactgcaccgtgggctacatcatcgagtcggttctgggggttcct
ctgacccgcagcaacctgtttcactcccacctggagaacctgcaacaggtgtcccgaacg
gagatacacaagcagatcactctcagttatgggatgttcgaaaacaagagtaacatcatc
aacttcaaaggggcttttcctgtggaggaggatccatcaaggttcaagtcggtgcactgt
ctcctgtacccggacaccccctggtgcccccctcaggttgccttctag
DBGET
integrated database retrieval system
