KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130189340
Entry
130189340         CDS       T09868                                 
Symbol
actb2
Name
(RefSeq) actin, cytoplasmic 2
  KO
K05692  actin beta/gamma 1
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03082  ATP-dependent chromatin remodeling
pswi04145  Phagosome
pswi04210  Apoptosis
pswi04510  Focal adhesion
pswi04520  Adherens junction
pswi04530  Tight junction
pswi04810  Regulation of actin cytoskeleton
pswi04814  Motor proteins
pswi04820  Cytoskeleton in muscle cells
pswi05100  Bacterial invasion of epithelial cells
pswi05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130189340 (actb2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    130189340 (actb2)
  09143 Cell growth and death
   04210 Apoptosis
    130189340 (actb2)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130189340 (actb2)
   04520 Adherens junction
    130189340 (actb2)
   04530 Tight junction
    130189340 (actb2)
  09142 Cell motility
   04814 Motor proteins
    130189340 (actb2)
   04820 Cytoskeleton in muscle cells
    130189340 (actb2)
   04810 Regulation of actin cytoskeleton
    130189340 (actb2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130189340 (actb2)
   05100 Bacterial invasion of epithelial cells
    130189340 (actb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pswi03021]
    130189340 (actb2)
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130189340 (actb2)
   03036 Chromosome and associated proteins [BR:pswi03036]
    130189340 (actb2)
   03029 Mitochondrial biogenesis [BR:pswi03029]
    130189340 (actb2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pswi04812]
    130189340 (actb2)
   04147 Exosome [BR:pswi04147]
    130189340 (actb2)
Transcription machinery [BR:pswi03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     130189340 (actb2)
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     130189340 (actb2)
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     130189340 (actb2)
    NuA4 complex
     130189340 (actb2)
  Chromatin remodeling factors
   BAF complex
    130189340 (actb2)
   PBAF complex
    130189340 (actb2)
   GBAF(ncBAF) complex
    130189340 (actb2)
   SWR1 complex
    130189340 (actb2)
Mitochondrial biogenesis [BR:pswi03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    130189340 (actb2)
Cytoskeleton proteins [BR:pswi04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     130189340 (actb2)
Exosome [BR:pswi04147]
 Exosomal proteins
  Proteins found in most exosomes
   130189340 (actb2)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 130189340
NCBI-ProteinID: XP_056264103
LinkDB
Position
23:17573946..17578148
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagatgaaatcgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgctggagacgacgcccctcgggctgtcttcccctccatcgttggtcgccccaggcat
cagggagtgatggtgggcatgggccagaaggacagctacgttggtgatgaagcccagagc
aagagaggtatcctgactctgaagtaccccattgagcacggtattgtgaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgagagttgcacctgaggag
caccccgtcctgctcacagaggcccccctgaaccccaaagccaacagggaaaagatgacc
cagatcatgttcgagaccttcaacacccccgccatgtacgttgccatccaggctgtgctg
tccctgtacgcctctggtcgtaccaccggtatcgtcatggactccggtgacggtgtgacc
cacacagtgcccatctatgagggctacgctctgccccacgccatcctgcgtctggatttg
gccggccgcgacctcacagactacctcatgaagatcctgacggagcgtggttactccttc
accaccacagctgagagggaaatcgtgcgtgacatcaaggagaagctgtgctacgtcgcc
ctggacttcgagcaggagatgggcaccgccgcctcctcctcctccctggagaagagctac
gagctgcccgacggacaggtcatcaccatcggcaacgagaggttccgttgcccagaggcc
ctcttccagccttccttcctcggtatggagtcctgcggaatccacgagaccacctacaac
agcatcatgaagtgtgacgtcgacatccgtaaggacctgtacgccaacaccgtgctgtcc
ggaggtaccaccatgtaccccggcatcgccgacaggatgcagaaggagatcaccgccctg
gccccgtccaccatgaagatcaagatcatcgccccaccagagcgtaaatactctgtctgg
atcggaggctccatcctggcctctctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgagtccggcccatccatcgtccaccgcaaatgcttctaa

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