Pseudoliparis swirei (Mariana hadal snailfish): 130189791
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Entry
130189791 CDS
T09868
Symbol
fbxw7
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130189791 (fbxw7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130189791 (fbxw7)
04121 Ubiquitin system [BR:
pswi04121
]
130189791 (fbxw7)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
130189791 (fbxw7)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130189791 (fbxw7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_RIG_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_RIG_1st
F-box
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
PQQ_2
Beta-prop_IFT140_2nd
WD40_RFWD3
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_LRRK2
WD40_like
KNTC1_N
Beta-prop_IFT140_1st
eIF2A
CDtoxinA
PALB2_WD40
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
130189791
NCBI-ProteinID:
XP_056264701
LinkDB
All DBs
Position
24:6647042..6705900
Genome browser
AA seq
612 aa
AA seq
DB search
MLRHCPIPRFSSGARRKMPHVAFGKEKTSSHVDKADPEHVAAEPVPPQKVLKIFSLNIIA
QGLPFCRRRVSFMKRKLDHGPEVRSFPSGKKPCKGSEYPSPTGIVPCPSTPTTFGHIRTA
NCQGQQRRRITSIQPPTGLQEWLRTFQSWTGPEKLLALDELIDSCEPTQVKHMMQVIEPQ
FQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCREEGIDEPLP
LKKRKIVKPGFTHSPWKSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFCGNRIV
SGSDDNTLKVWSAITGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIH
TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV
SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH
TLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN
FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEET
KLLVLDFDVDMK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcattgccctattccccgtttctcgtctggcgctcggagaaagatgccacat
gttgcctttgggaaagagaagacttcgtcccacgtcgacaaggcagaccccgagcacgtc
gccgcggaaccggtaccccctcagaaagttctcaagatattcagcctcaacatcattgca
cagggtttgcctttctgtcgcagacgggtgagttttatgaagagaaagttggaccatggc
cccgaggtccgatctttcccttcaggaaaaaagccctgcaaaggctcagagtatccgagc
ccgacaggaatcgtcccatgtccatccacacccaccacatttggccacattagaacagcc
aattgtcaggggcagcagagacggcgcatcacctcaatccagccacccacgggtctccaa
gaatggctccgaacatttcagagctggactggcccagagaagctgctggcgctggatgag
ttgattgacagctgtgagcccacacaagtcaagcatatgatgcaggtgatcgagccgcag
tttcagcgagacttcatctccctgctgcccaaagagctggctttgtacgtgctgtcgttc
ctggaaccgaaggacctccttcaagcggcccagacgtgtcgctactggcgcatcctggca
gaagacaacctgctgtggagggagaaatgcagggaagaaggcatcgatgagcctctgccc
ctcaagaagaggaaaatcgtcaagcctggcttcacccacagcccctggaagagtgcctac
atccggcagcacagaatagacaccaactggaggagaggggacctcaaatcacccaaggtg
ctgaaaggtcacgacgaccacgtgatcacctgcctccagttctgtggcaaccgcatcgtc
agcggctccgacgacaacacgctcaaagtctggtcggccatcacaggaaagtgtctgcgc
acgttggtgggccacacggggggcgtgtggtcatcccagatgagagacaacattatcatc
agcggctccactgatcgcacactcaaggtctggaacgcagagacaggcgaatgtatccac
accctctacgggcatacctcaacagtgcgctgcatgcacctccacgagaaaagggtggtc
agcggctctcgtgacgccacgctgcgcgtctgggacatcgagacgggtcagtgtctccac
gtgctcatgggccacgtggcggccgtgcgctgcgtccagtacgacggccggcgggtggtc
agcggtgcctacgacttcatggtgaaggtgtgggaccctgagacggagacctgcctccac
acgctgcagggccacaccaacagggtgtactcgctacagtttgatgggatccacgtggtg
agtggctctttggacacgtccatcagggtctgggacgtggagacgggcaactgcatccac
acgctgacggggcatcagtccctcaccagcggcatggagctcaaagacaacatcctggtc
tccggcaacgccgactccaccgtcaagatctgggacatcaagacgggccagtgcctgcaa
acactgcaaggtccccacaagcaccagagcgccgtgacgtgcctccagttcaacaagaac
tttgtcatcaccagctcggacgacggcacggtcaaactgtgggacctgaagacgggcgag
ttcatccgcaacctggtgaccctggagagcggcggcagcggcggcgtggtgtggcgcatc
cgagcctccaacaccaagctggtgtgcgcggtgggcagccgcaacggcacggaggagacc
aagctgctggtgctggactttgacgtggacatgaagtga
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