Pseudoliparis swirei (Mariana hadal snailfish): 130190324
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Entry
130190324 CDS
T09868
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like
KO
K06751
MHC class I antigen
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
pswi04145
Phagosome
pswi04218
Cellular senescence
pswi04514
Cell adhesion molecule (CAM) interaction
pswi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130190324
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130190324
04145 Phagosome
130190324
09143 Cell growth and death
04218 Cellular senescence
130190324
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130190324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130190324
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
130190324
Exosome [BR:
pswi04147
]
Exosomal proteins
Proteins found in most exosomes
130190324
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
Antigens
130190324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
C2-set_3
Motif
Other DBs
NCBI-GeneID:
130190324
NCBI-ProteinID:
XP_056265675
LinkDB
All DBs
Position
1:complement(20766520..20773293)
Genome browser
AA seq
306 aa
AA seq
DB search
MAPWTLSLLVLSLQGAAAVIHSLKFFYTASSGVPNFPEFVTVGLVDEQLMLHYDSNTRRA
EPKQAWMSRVTEEDPQYWKRNTEVSRFSQQVFKVNIETLKKRFNETGDVHMVQMMSGCEW
DDETGEVKGYEQYGFDGEDFLSYDLETESWIAPRQQAVITKLKWEQSKARMAHKKHYLTQ
VCPDWLKKYVTYGRSSLMRTELPSVSLLQKTPSSPVRCHATGFYPRSAALFWSKDGKELR
GVDHGEILPNHDGSFQMSVDLKLSAVPAEDWRRYQCVFFSCLVWRSPSSSRWKKLGSGPT
QRSLLA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtggactctgagcctcctggtgctgagccttcagggcgcggcggcagtgatt
cactctctgaagttcttctacactgcgtcgtctggagtcccaaacttcccagagtttgtg
actgttggtctggttgatgaacagctgatgcttcactatgacagcaacaccaggagagca
gaacccaaacaggcctggatgagcagagtcacagaggaggatcctcagtactggaagagg
aacactgaggtctccaggttcagccagcaggtcttcaaagtcaacattgaaactctaaag
aaacgcttcaatgaaactggagatgtccacatggtacagatgatgtctggctgtgaatgg
gatgatgagactggtgaggtcaaaggttatgagcagtatggttttgatggagaggacttc
ctgtcttatgacctggagacagagtcatggatcgctcccagacaacaggccgtcatcacc
aaactcaagtgggaacagagcaaagccaggatggcacacaaaaagcactacctcactcag
gtgtgtcctgattggctgaagaagtatgtgacctatgggaggagctctctgatgagaaca
gagcttccctcggtgtctctcctccagaagactccctcctctccagtccgctgccacgcg
accggcttctacccgcgctcagccgcactgttctggagcaaagatggaaaggagctgcgg
ggcgtggaccacggagagatcctccccaaccacgacggatccttccagatgagcgtcgac
ctgaaactctcagcagtcccagctgaagactggaggaggtaccagtgtgtgtttttcagc
tgtctggtgtggaggagcccatcgtcatcccgctggaagaagctgggatcaggaccaacg
cagagaagccttctggcatga
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