Pseudoliparis swirei (Mariana hadal snailfish): 130190598
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Entry
130190598 CDS
T09868
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00514
Other types of O-glycan biosynthesis
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130190598
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130190598
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130190598
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
130190598
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
O-Glycan
130190598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
130190598
NCBI-ProteinID:
XP_056266075
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All DBs
Position
24:complement(4737692..4749303)
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AA seq
356 aa
AA seq
DB search
MWRPSGGSSGTFSSAAAAAAAVTCLLVTGTLVVTVGHPSGGEPPAEPPASGKAFSAYFRK
LTRERRAMSGPRRSSAPAGPVERLSPEDLFIAVKSTGKYHRQRLDLLLDTWISRNMQQTF
VFTDGEDEKLRKRMGAHLINTNCSAAHSRQALSCKMAQEYDTFMKSGRKWFCHVDDDNYV
NVGSLLRLLSQHAHTHDVYIGRPSLERPIEATQRLGATHTVRGLPWRRPCGDVMCGRVCF
CVSRGLALRMKPWASDGAFMATAELIRLPDDCTVGYIAEALLGVSLIRSPLFHSHLENLG
LVSDIHNQVTLSYGSVESSRNTVTLKGPFSIQQDPTRLRSLHCLLHPDAARCPRPP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaccctccggtgggtcaagcggcaccttcagctccgccgccgccgccgccgcc
gcggtcacctgtctgctcgtgaccgggacgctggtcgtcaccgtcgggcacccgagcggc
ggagagccgccggcggagcctccagcgagcgggaaagcgttctcggcgtacttcaggaaa
ctcacccgggagaggcgcgcgatgagcggcccgcggaggagcagcgctcccgccgggccg
gtggagcgcctctccccggaggacctgttcatcgcggtgaaaagcaccgggaagtatcac
cggcagaggctggatctcctgctggacacctggatctccagaaacatgcaacagacgttc
gtgttcactgacggagaggacgagaagctgaggaagaggatgggagctcacctgatcaac
accaactgctccgcggcgcacagccgccaggccctctcctgcaaaatggctcaggagtac
gacacctttatgaagtcaggcaggaagtggttctgccacgtggacgacgacaactacgtg
aacgtgggctcgctgctgcggctgctgtctcagcacgcgcacacacacgacgtctacatc
ggccggcccagcctggagcgccccatcgaggccacgcagcggctcggcgccacgcacacg
gtacgcgggttaccatggagacggccatgtggagatgtaatgtgcgggcgtgtgtgcttc
tgtgtgagtcgtggtctcgctctcaggatgaagccctgggcgagcgatggcgccttcatg
gcgacggccgagctcatccgcctcccggacgactgcaccgtcggctacatcgcggaggcg
ctgctgggcgtgagcctcatccgctcgccgctgttccactcccacctggagaacctggga
ctggtgtcagacatacacaaccaggtgaccctcagctacggctcagtggagagcagcaga
aacaccgtcaccctgaaggggcccttctccatccaacaggatcccaccaggctcaggtcg
ctccattgtctgctgcacccagacgccgctcgctgcccccggccgccgtaa
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