Pseudoliparis swirei (Mariana hadal snailfish): 130190895
Help
Entry
130190895 CDS
T09868
Symbol
trim37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130190895 (trim37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130190895 (trim37)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130190895 (trim37)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130190895 (trim37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
zf-C3HC4_2
HlyD_2
BORCS6
PIN_8
Motif
Other DBs
NCBI-GeneID:
130190895
NCBI-ProteinID:
XP_056266458
LinkDB
All DBs
Position
3:complement(24296011..24311334)
Genome browser
AA seq
909 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCSLSKHEDNDKDKCDGHLEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLVEIYEQHVTKVKEEVAKLRRRLMELISLVQEVERNMEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLHSCSKSDLISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLVNFSTLRQRADPVYSPP
LQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLSTTSDTLVLRYQVRSPTFFQKCRDQYWYIS
QLESAQSGYAQQITNLKERLAIELFRRQTSRSSSPPDMRLAAGPTASERDGRSAKSDDDF
QTAKKDHEEEERTQQDDSNELSDGDLEVDCLTEEEVNPLDGSSTSGSSTATSNTEENDID
EETMSGENDVDFIGHLDTEEGELPDDLVGASGGSAVRSLHRSSASRGGGGAPCGAVGPGG
GGLMEIDPVILIQLLDLKERRSVESLWGLQPRPPGPLLHSHAPHLHSRKDRDRRPQAVRR
SAPDSGVLIRLKAQMAELRSKMADAKSQLPEPRGPAEPRGPAEEVTAHLADSEMTACRKA
VEQDLLGRAGAARSRPGRPARKSVSPVLDGSSLVMKRRSPEEEEKELRELSLQLKEVLAA
AEGALAPDGPLGPPVSPCQAEQQLFGASGPRDDVFSLGGPSYMTGAKSCGSRALGAATLD
RDSDRSLLEEPSAPSLSQRDPSPSVLAAPASSDSEDEALRSNDSRYDNQTPPCSGEQLLC
DDVSLPADR
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaaagtgttgagagcatcgctgaagtgttccgctgcttcatctgcatggag
aagctgagggacgctcgcctctgcccccactgctccaagctctgctgcttcagctgcatc
cggcgctggctgacggagcagagagctcagtgtcctcactgccgcgctcctctgcagctc
agggagctggtgaactgtcgctgggcggaggaggtgacccagcagctggacacgctgcag
ctgtgcagcctcagcaagcacgaggacaacgacaaggacaagtgtgacggccacctggag
aagctgagtgtgttctgctggacctgtaagaagtgcatctgtcaccagtgtgctctgtgg
gggggcatgcacggtggccataccttcaagcctctggtggagatctacgagcagcacgtg
accaaagtgaaggaggaggtggccaagctgcggcgccgcctcatggagctcatcagcctg
gtgcaggaagtggagaggaacatggaggccgtccggggagcgaaggacgagcgcgtgaga
gaaatccgaaatgcggtggagatgatgatcgcccgcctggacaaccagctgaagaacaaa
ctcatcacgctcatgggccagaagacgtccctgacgcaggagacggagctgctggagtcg
ctgctgcaggaggtggagcaccagcttcactcgtgcagtaagagcgatctgatctccaag
agccccgagatcctgctgatgttccagcaggtgcacaggaagcccatgcagtccttcgtc
accacgccggtgccccccgacttcaccagcgagctggttccagcctacgactccagcact
tttgttctggtcaacttcagcaccctcaggcagcgggctgacccggtctacagtcctcct
ctgcagatatccggcctctgctggagactcaaagtctacccggacgggaacggcgtggtc
cgggggaactacctgtccgtgttcctggagctgtcggctggactccctgaaacatcaaag
tacgagtaccgcgtggagatggtccaccaggcctccagcgacccgaccaagaacatcatc
cgtgagtttgcctctgacttcgaggtgggtgagtgttggggctacaaccgcttcttcagg
ctggacctgctggccagtgagggctacctgagcacgacgagcgacacgctggtgctgagg
taccaggttcgctcgcccaccttcttccagaagtgccgagaccagtactggtacatcagc
cagctggagtcggcccagagcggctacgcccagcagatcaccaacctcaaggagaggttg
gccatcgagctgtttcgccgccagacgtcccgtagctcctccccccccgacatgaggctc
gccgccggccccacggcctcggagagagacggccgctcggcgaagagcgacgacgacttc
cagacggcgaagaaagaccacgaggaagaggagcggacgcagcaggacgactccaacgag
ctgtctgacggggacctggaggtggactgcctgacggaggaggaggtgaacccgctggac
ggcagcagcacctcggggagctccacggcgaccagcaacacggaggagaacgacatcgac
gaggagaccatgtcgggagagaacgacgtcgacttcatcggccacctggacacggaggaa
ggagaactgcccgacgacctggtgggagcctcaggaggatccgccgtgcgttctctccat
cgtagctccgcctctcgcggcgggggaggagctccgtgcggcgccgtgggcccggggggc
ggcggcctcatggagatcgacccggtgatcctgatccagctgctggacctgaaggagcgg
cgcagcgtggagtctctgtggggcctccagccccgcccaccggggcccctgctgcacagc
cacgctcctcatcttcactccaggaaggaccgggaccggcggcctcaggcggtgcggcgc
tccgctccggactcgggggtcctgatccgcctcaaggcccagatggccgagctccgcagc
aagatggccgacgccaagagccagttgccggagccccgggggcccgcggagccccggggg
cccgcggaggaggtcaccgcccacctcgccgactctgagatgaccgcctgccgcaaggcc
gtcgagcaagacctcctggggagggccggcgctgctcggtccagacccggtcggcccgcc
aggaagtctgtgtctccggtgctggacggcagctccctggtgatgaagaggaggagtcca
gaggaggaggagaaggagctgagagagctcagcctgcagctcaaggaggtgctggcggcg
gcagaaggggccctggcgcccgacggccccctggggcccccggtgtctccctgccaggcg
gagcagcagctgttcggggcctcgggcccccgggacgacgtcttctccctgggggggccg
agctacatgaccggggccaagagctgcggcagtcgggccctcggggcggccacgttggac
cgtgactccgatcgttccctcctggaggaaccttctgctccatcgctgtcacagcgagat
ccgtcgccgtccgtcttggcggcgccggcgagcagcgacagcgaggacgaagcgctgcgg
agcaacgactctcgctacgacaaccagaccccgccctgctcaggagagcagcttctgtgt
gacgacgtcagtctacctgctgacaggtga
DBGET
integrated database retrieval system
