Pseudoliparis swirei (Mariana hadal snailfish): 130193629
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Entry
130193629 CDS
T09868
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like isoform X1
KO
K01116
phosphatidylinositol phospholipase C, gamma-1 [EC:
3.1.4.11
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00562
Inositol phosphate metabolism
pswi01100
Metabolic pathways
pswi04012
ErbB signaling pathway
pswi04020
Calcium signaling pathway
pswi04070
Phosphatidylinositol signaling system
pswi04370
VEGF signaling pathway
Module
pswi_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
130193629
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
130193629
04370 VEGF signaling pathway
130193629
04020 Calcium signaling pathway
130193629
04070 Phosphatidylinositol signaling system
130193629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130193629
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
130193629
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
130193629
Endocytosis
Macropinocytosis
Phospholipase C
130193629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
SH2
PI-PLC-Y
EF-hand_PLCG2
C2
PH
SH3_1
EF-hand_PLCG1
SH3_9
PH_12
SH2_1
EF-hand_6
SH3_2
EF-hand_9
GDPD
EF-hand_7
DUF5398
Motif
Other DBs
NCBI-GeneID:
130193629
NCBI-ProteinID:
XP_056270209
LinkDB
All DBs
Position
5:9162710..9187398
Genome browser
AA seq
1316 aa
AA seq
DB search
MCAARFSGCHNGCGEEAATGPAGPVPASRILDWTEAGPRILHSLEMGTVMTVFYQKKSQR
PERRTFQIKQDMRQIVWTRNPDKVEGEVDIREIRELRLGKGSRDFERYPEDARKHDPAHC
FIVLYGLEFRLRTLSVAAFSEEEVNMWMTGLNWLMTDTQRAPAPQQIDRWLRKQFEVMDR
SHEGSITVKDVKALLPQVNYRVPSMRFLKDKLQEVEDRSDLSYPNFSQLYRTLMFDAQKT
IIEQLELSFPLRNVDRPELCQISLYDFQKFLQMDQKESWASDLSRVREFLTGYLRGGPQP
EPMLQLDEFLTFLFSKENSVCDPRLSPVVADDMKRPLSQYWISSSHNTYLTGDQFSSESS
LEAYARCLRMGCRCIELDCWDGPDDLPIIYHGHTLTSKIKFLDVLHTIKEQAFVTSEYPV
ILSIEDHCSVVQQRNMATHFKKVFGDLLLTKPVDSNAEELPSPYQLRRKILIKHKKLVEG
TLYEEVTSASFSENDISNSLRNGILYLEDPIDHTWTPHYFVLTSHKIYYSEETSHYQTAD
EEEDDEGKVECNNNNNEQHCAERWFHGKLGGGRDGRQVAEKLLQEYCEGGAKDGTFLVRE
SETFVGDYTLSFWRSGRVQHCRIHSRQESGATRFYLTDNLVFDSLYRLICHYRDTPLRCN
EFEMRLGGPVPQPNAHESRDCVFSRWYHSSLSRVQAEHMLMRVPRDGAFLVRKRSENNSY
AISFRAEGKIKHCRIQQEGRLFMLGSSAEFESLVDLVSYYEKHPLYRKMRLRYPINEDTL
DRMGTTELDYGALYEIRSPHFYVEANKMPTARCTVKALYDYRAQREDELCFPKQALVLNV
DKQEGSWWRGDYGGKKQLWFPANYVEEIPSSPTRELDEVPTENSPLGTFLKGFIDVPTCH
VVVHKDGKNSRPYVFTIHSQQPSSHPVQTLDVAADSLEDVTSWVAKIREATQNADARMQE
EKQMERRKKIAVELSELVVYCRPVPFNEDKIGTDRACYRDMSSFPETKAEKFAARSRGKR
FLQYNRRQLSRVYPRGQRLDSSNYDPLPVWLCGSQLVALNFQTPDKPMQLNQALFMLGGA
SGFVPQPDAMRDDAYDPFDKDTLHVEPITIQLQLLGARHLPKTGRSIVCPFVEVEICGTE
YDSCKCKTDVVADNGLNPVWVQKQFVFDIHNPTFSFLRFTVYEEDMFSDPNFLAQATYPV
RLLRTGYRSIPLKNSYNEELELASLLIHIEIVNAKEEDDENIYMTIQRLRDRTSELSTQV
SLLERSGSGDLGYQQMLEELRSAQDQLSELVEARNHRLMEKKRREKLRQQVAAKRS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcggccaggttcagcggctgccacaatggctgtggcgaggaagccgccacgggg
cctgctggtccggtcccggcctccaggatactggactggacggaggccggtccccgcatc
ctccacagcctcgagatggggacggtgatgaccgtcttctaccagaagaagtcccaaagg
cccgagaggagaaccttccagataaagcaagacatgcggcagatagtttggacacgaaac
ccggacaaagtcgaaggagaggttgacatacgagagatccgggagctgcggttggggaag
ggctcccgggattttgagcgctacccggaggatgcccgtaaacatgaccccgcccactgc
ttcatcgtgctctacggcctggagtttcgcctcaggacgctcagcgtggctgccttcagc
gaagaggaggtcaacatgtggatgactggtctcaactggctgatgacggacactcagaga
gctcccgccccacagcagatagacaggtggctgaggaaacagtttgaagtcatggacagg
agccacgagggcagcatcacagtgaaggatgtgaaagctctgctgcctcaggtcaactac
agagtgccgagcatgcgcttcctgaaagacaagctgcaggaggtggaggacaggagtgac
ttgtcgtaccccaacttctcacagctctacagaacgctgatgtttgacgctcagaagacg
atcattgagcagctggagctctccttcccactccggaatgttgatagaccggagctttgt
cagatctccctctacgacttccagaagtttttacagatggaccaaaaggagtcctgggcg
tcggatctgagtcgcgtcagagagttcctcacggggtacctgaggggtggaccgcagcct
gagcccatgctgcagctcgatgagtttctgacgttcctgttctccaaagagaattctgtg
tgtgaccctcgactttcccccgttgttgctgatgacatgaaaaggccgctgtctcagtac
tggatctcctcttcacacaacacctacctgacaggtgaccagttctccagtgaatcctct
ctggaagcctacgcccgctgcctcaggatgggctgccgctgcattgagctggactgctgg
gacggacccgacgacctcccaatcatctaccacggccacacgttgacctccaagatcaaa
ttcctggatgtgctgcacaccatcaaagaacaagccttcgtcacatccgagtaccctgtg
atcctgtccatcgaggaccactgcagcgtggtccagcagaggaacatggccacgcacttt
aagaaggtgttcggggatctgctgctcaccaagcccgtcgattccaacgcggaggagctt
ccctcgccgtaccagctccgccggaagatcctcatcaagcacaagaaactggtcgagggc
acgctgtatgaagaggtgacttcagccagcttctccgaaaacgacatcagcaactcgctg
aggaacggcatcctctacctggaagaccccatcgaccacacgtggactccacactatttc
gtcctgaccagtcataagatttactactcggaggagacgtcccactaccagacggcggat
gaggaggaggacgacgaaggaaaagtggagtgcaacaacaacaacaacgagcagcactgc
gcagagcgctggttccacgggaagctgggcggaggtcgcgatggtcgacaggtggcggag
aagctcctacaggaatactgcgagggcggggccaaagacggcaccttcctggttcgggag
agcgagacgtttgtcggggactacaccctctcgttctggcgctccggtcgtgtccagcac
tgcaggatccattcgcgccaggagtccggcgccacccgcttctacctcaccgacaacctg
gtgtttgacagcctctaccgcctcatctgccactacagagacacgcctctgcgctgcaac
gagtttgagatgaggctgggcggccccgtgcctcagcccaacgcacacgagagcagagat
tgtgtgttctccaggtggtaccactccagtctgtcccgcgttcaggctgaacacatgctg
atgcgcgtccccagagacggagcgttcctggtgcggaaacgcagcgaaaacaactcctac
gccatctccttcagggcggaggggaagatcaaacactgtcgcattcagcaggagggccgt
ctcttcatgctgggcagctcggcagagttcgagagtctcgtggaccttgtgagttactac
gagaagcatcctctgtaccgcaagatgaggctgcggtaccccatcaacgaggacacgctg
gaccgcatgggcaccacggagcttgactacggggctctctatgagatccgcagccctcat
ttctatgtggaagccaataagatgcccacagcacggtgtacggtcaaagctctgtacgac
tatcgagctcagagggaagacgagctctgtttccccaaacaggccctcgtcctcaatgtg
gataagcaggagggcagctggtggcgtggtgactacggaggaaagaaacagctgtggttt
cctgcaaactacgtggaggagattcccagttctcccactagagagctggatgaagtacca
acagagaatagtcctctcggaacattcctgaagggcttcattgatgtacccacctgccat
gtcgtggtgcataaggacgggaagaattcgcgtccctacgtgttcacgatccactcccag
cagccgtcgtctcacccggttcagacgctggacgtggcagccgacagtctggaggacgtg
accagctgggtggccaagatccgagaggccacacagaacgctgacgctcggatgcaggag
gagaagcaaatggagaggaggaagaagatagcggtggagctgtctgagctggtggtctac
tgcagaccggtccccttcaacgaggacaagatcgggaccgatagggcgtgttaccgggac
atgtcctcgttcccagagacgaaggcagagaagtttgcggcgcgcagtcgggggaaacgc
ttcctgcagtacaatcgccgccagctttccagggtttaccccagaggacagaggctggac
tcgtccaactacgacccgctgcccgtgtggctctgtggctcccagctggtcgcactcaat
ttccagaccccagataaacccatgcagctgaaccaggccttgttcatgctgggaggggcc
agtggcttcgttccacagcctgatgccatgagggacgacgcgtatgaccctttcgacaag
gacaccttacacgtggagccaatcaccatccagttacagctgctgggagcccgtcatctc
cctaaaactggccgcagcatcgtctgtcccttcgtggaggtggagatctgtggaaccgag
tacgacagctgcaaatgcaagacggacgtcgtcgctgacaacgggctgaatcctgtgtgg
gtgcagaagcagtttgtgtttgacatccacaaccccaccttctccttcctgcgcttcacg
gtctacgaggaggacatgttcagtgatcccaacttcctggcacaggcgacctaccccgtc
cgtctgctgcgaacaggctacaggagcatccctcttaagaacagctacaacgaagagctg
gagttggcgtcacttctgatccatatagagatcgtcaatgcaaaggaggaagacgatgag
aacatctacatgaccatccagcgtctgcgggatcgaaccagcgagctgtccacccaggtt
tccctcctggagaggtcgggctcgggggatctgggataccagcagatgctggaggagctc
agatcagctcaggaccaactgagtgagctggtggaggctcgaaaccacaggctgatggag
aagaagagacgggagaaactgaggcagcaggtggcagcaaagcgcagctaa
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