Pseudoliparis swirei (Mariana hadal snailfish): 130195808
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Entry
130195808 CDS
T09868
Symbol
nr1h4
Name
(RefSeq) bile acid receptor
KO
K08537
farnesoid X receptor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130195808 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130195808 (nr1h4)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130195808 (nr1h4)
Nuclear receptors [BR:
pswi03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
130195808 (nr1h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Put_Phosphatase
Motif
Other DBs
NCBI-GeneID:
130195808
NCBI-ProteinID:
XP_056273497
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Position
6:16618266..16630493
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AA seq
485 aa
AA seq
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MNEWVGPDINVVGALPIPPGDEFSISESSHLFDILADQVSPLLQDSDILPFTGYSSMQYQ
SMEPNMSSTPYYSNQNYYPQYHGDEWFSHTGIYELRKEPLGVGYDAEMEEVSTVMPVVCK
RTRHMLQAGRIKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNTKASPRQSTGDETEGADNT
DHKHVSSTTKLSREKVEMTKEQRALMKAIVDAYNRHQIPQDVAKKLLQEQYSAEENFLLL
TEMATSQVQVLVEFTKNIPGFLSLDREDQIALLKGSTVEAMFLRSAQVFSRKMPNGHTVV
LEERIRKSGIPDEFMTPMFNFYKSIGELHMVQEEQALLTAITILTPDRPYVKDHQAVERL
QETMLNVLRKLCVLQHPQEPQYFARLLGRLTELRTLSHYHAEMLTSWKMNDHKFTPLLCE
IWDVQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtgggtgggccctgacatcaatgtggtgggagcgctaccaattccacccggc
gatgaattctccatctcagagagctcccacttgtttgatatcctggcagatcaggtcagt
cctctcctgcaggattccgacatcttacccttcaccggctattccagcatgcagtatcag
tccatggagcctaacatgtcttccacaccatactactccaatcagaactactaccctcag
taccatggagacgaatggttctcacacacagggatatatgaactgaggaaagaacctctg
ggggtcggctatgatgctgagatggaggaggtgtccactgtgatgcccgttgtgtgcaag
aggacccgacacatgttgcaggctggaaggatcaaaggggaagaactatgtgtggtgtgt
ggagacaaggcctctggataccactataacgctctcacctgtgagggatgtaaaggtttc
ttcagaagaagcataaccaagaacgctgtgtacaaatgcaagagtggtggaaactgtgaa
atggacatgtacatgcgcaggaaatgccaggagtgccggctaagaaagtgcaaggagatg
ggaatgctggctgaatgcctgctgacagagatccagtgtaagtctaaaagactgcggaag
aacaccaaggcgtccccgagacagtcgaccggagacgagacagagggggcggacaacaca
gaccacaagcacgtctcctcaaccaccaaactgtcgagggaaaaggtcgaaatgaccaaa
gagcagcgggctctcatgaaagccatcgtagatgcttacaacagacatcagattcctcaa
gacgtggccaaaaaactgctgcaagaacagtacagtgcagaggaaaactttctcctattg
acagaaatggctacaagtcaagttcaggttttggtggaatttacaaagaatattccaggt
tttctctctctggatcgtgaggatcagatcgctctgctgaagggttcgactgtggaggcc
atgtttctacgctcagctcaagttttcagcagaaagatgcccaacggacacacggtagtt
ttggaagagaggatacgcaagagtggtataccagatgaattcatgacacccatgttcaac
ttctacaaaagcatcggtgaactccacatggtgcaggaggaacaggctctactcactgcc
ataaccatcttgacgccagaccggccttacgtcaaggatcatcaggctgtcgagaggctt
caggagaccatgctgaacgtgctgaggaagctgtgtgtcctgcagcacccacaggagccg
cagtactttgctcgtctgctgggccgcctgacggagctgagaacactcagccactaccac
gcagagatgctcacgtcctggaaaatgaacgaccataaatttacgccgctgctctgtgaa
atatgggacgtgcagtga
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