Pseudoliparis swirei (Mariana hadal snailfish): 130195900
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Entry
130195900 CDS
T09868
Symbol
fads2
Name
(RefSeq) LOW QUALITY PROTEIN: acyl-CoA 6-desaturase
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00592
alpha-Linolenic acid metabolism
pswi01040
Biosynthesis of unsaturated fatty acids
pswi01100
Metabolic pathways
pswi01212
Fatty acid metabolism
pswi03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
130195900 (fads2)
01040 Biosynthesis of unsaturated fatty acids
130195900 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
130195900 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pswi01004
]
130195900 (fads2)
Enzymes [BR:
pswi01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
130195900 (fads2)
Lipid biosynthesis proteins [BR:
pswi01004
]
Desaturase
Front-end
130195900 (fads2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
CHS4
Motif
Other DBs
NCBI-GeneID:
130195900
NCBI-ProteinID:
XP_056273653
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Position
6:11453384..11462389
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AA seq
445 aa
AA seq
DB search
MGGGGQLTEPGEKVIGXTGGVYTWEEVQSHCNKNDQWLVINRKVYNITQWAKRHPGGIRV
ISHYAGEDASEAFTAFHPNLEFVRKFLKPLLIGELAATEPSQDRNKNATIIQDFHTLRAK
VEREGLFQARPLFFCLHLSHILLLEALAWLIIWIWGTSWTLTFLSAVMLATAQLQAGWLQ
HDFGHLSVFKKSRWNHLLHKFAIGHLKGASANWWNHRHYQHHAKPNIFSKDPDVNMLHVF
VVGATQPVEYGIKKIKYMPYHYQHQYFFLVGPPLLIPVYFHIQIIRTMISRHDWVDLAWS
LSYYLRYLCCAVPMYGLFGSVVLISFVRFLESNWFVWVTQMNHLPMNIDHDQHQDWLSMQ
LHATCNIEQSPFNDWFSGHLNFQIEHHLFPTMPRHNYHLVTPLVRALCEKHGVPYQVKTM
WRGLADVFRSLKNSGDIWLDAYLHK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtggaggccagctgacggagccaggagagaaggtcatcgggtgaactggtggc
gtctacacctgggaggaggtgcagagccactgcaacaagaatgaccagtggctggtgatc
aatcgaaaggtttacaacatcacgcagtgggccaaaaggcacccaggagggatccgagtc
atcagccactacgctggagaggatgcctcggaggcattcactgcttttcatcccaactta
gagtttgtgcgtaagtttctgaagcctctgctgattggagagctggcagcgacagagccc
agccaggaccgaaacaaaaacgcgacaatcatacaggatttccacactttacgtgcgaag
gtggagcgcgagggtctgtttcaagctcggcctttgttcttctgcctccacctgagtcac
atcctgctgctggaggccctcgcctggctgatcatctggatctggggaacgagctggacc
ctgacctttctgagcgccgtcatgctggcaactgctcagctgcaggctggatggctgcag
cacgacttcggccacctgtctgtcttcaagaagtccaggtggaatcacttgttgcacaag
tttgccatcggccatttgaagggagcgtctgccaactggtggaaccaccggcattaccag
catcacgcgaaacccaacatcttcagtaaggaccccgatgtcaacatgttgcacgtcttc
gtagtcggagcgactcaaccggtggagtacggcattaaaaagatcaaatatatgccctat
cactaccaacaccagtacttctttctggttggacctccgcttcttattccagtgtacttc
cacattcagatcattcgcaccatgatttcccgccacgactgggtggatctggcctggtct
ctgtcttactacctgcgctacctttgctgtgcggtgcccatgtacggcctgtttggctcc
gtggtgctcatcagcttcgtcaggtttttggagagcaactggttcgtgtgggtgactcaa
atgaatcatctgccgatgaacatcgaccacgatcagcaccaggactggctgtccatgcag
ctgcacgccacctgtaatatcgagcagtcccccttcaacgactggttcagcggacacctc
aacttccaaatcgaacaccatttgtttcccacgatgccacgccacaactaccacctggtg
accccgctggtccgcgcgctgtgtgagaaacatggcgttccttaccaggtgaaaacaatg
tggcgaggcctcgcggatgttttcaggtcactgaaaaactccggcgacatctggctcgac
gcatatctccataaatga
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