Pseudoliparis swirei (Mariana hadal snailfish): 130196175
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Entry
130196175 CDS
T09868
Symbol
nkx3-1
Name
(RefSeq) homeobox protein Nkx-3.1
KO
K09348
homeobox protein Nkx-3.1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130196175 (nkx3-1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
130196175 (nkx3-1)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
Motif
Other DBs
NCBI-GeneID:
130196175
NCBI-ProteinID:
XP_056274042
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Position
7:complement(4730612..4732086)
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AA seq
198 aa
AA seq
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MEMSDTVKPVTSFLIEDILSLQHGAVFNGKRCSQKMERCSQWSEGSERFSEPLCPRGTAV
RVQTGSLDTSPRPSTSESSSFSSSEKQKRSRAAFTHLQVLELEKKFNHQKYLSAPERAHL
AGTLTLTETQVKIWFQNRRYKTKRKQQTLEFCKDVFTAEGLGLRDELVRSSLITSFCKAY
QCRPYMWDYRGPWGPTLW
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtctgacacagtcaaacctgtgacctcgttcctcatagaggacatcctctcc
cttcagcacggcgcggtctttaatggcaaacgctgttcacagaagatggaaagatgttca
cagtggagcgaaggatctgaaaggttctcagagccactctgcccccgggggacagccgtc
agagtgcagacagggtccctggacacatccccccgccccagcacctcagagtccagcagc
ttctcctcctcggagaaacagaagcgctccagagccgcgttcacacacctccaagtgctt
gaactggagaagaaattcaaccaccagaaatacctgtccgccccagagagggctcacctg
gccggcaccttaacactaacggagacccaagtgaagatttggtttcagaaccgcagatac
aagacgaaacgaaagcagcagacgttggagttctgtaaggacgtgttcacggcagagggt
ctgggtctgagagacgagctcgtccgatcatcactgatcacctccttctgcaaagcgtac
caatgcagaccctacatgtgggactacaggggcccctgggggcccacattatggtga
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