Pseudoliparis swirei (Mariana hadal snailfish): 130196230
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Entry
130196230 CDS
T09868
Symbol
pbx3b
Name
(RefSeq) pre-B-cell leukemia transcription factor 3b isoform X1
KO
K15610
pre-B-cell leukemia transcription factor 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130196230 (pbx3b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130196230 (pbx3b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
LZ3wCH
HTH_NDX
TraG-D_C
UCH
Motif
Other DBs
NCBI-GeneID:
130196230
NCBI-ProteinID:
XP_056274144
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Position
7:6855225..6914325
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AA seq
486 aa
AA seq
DB search
MSFSICVAQCTDSLAATMDDQARIMQSIGGVSLAGHSVQGGMALPPPHGHDGTDGDGRKQ
DIGDILHQIMTITDQSLDEAQAKKHGLNCHRMKPALFSVLCEIKEKTGLSIRGSQEEDPQ
DPQLMRLDNMLLAEGVAGPEKGSGSSAAAAAAAAAGGAADNSIEHSDYRAKLTQIRQIYH
TELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEA
VMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQGVG
STITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVNAAHAAAAAVQNSQANSPTTP
NSGFQMKDEEFQLDSAESKNTLLTNLFTGSSGSFNLPNSGDMFLSMQSLNGDSYQGAQVG
ANVKSQVDTLRHVISQTAGYSDALRGNTMYSPHGLTANGGWQDATTPSSVISPTEGPGSV
LSDTSN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcaatttgcgtggctcagtgcacagactctttagcggctactatggacgat
caagcccggatcatgcagtcgatcggcggtgtcagtctggccggtcactcggtacaagga
ggcatggcattgccgcctccacatggacacgatgggacagacggagacggaagaaaacaa
gacattggtgacattctccatcaaataatgaccataactgatcaaagtctggacgaggcg
caagcaaagaaacatggactgaactgtcacagaatgaaaccagcactcttcagcgttctc
tgtgaaatcaaagaaaagacaggtctcagcatccgtggttcccaggaggaggacccccaa
gacccccagctcatgcgtctggacaacatgctgctggcagagggcgtggcaggaccagag
aaagggagcggatcttcggccgccgcagctgcagccgcggccgccggaggtgcggccgac
aactccattgaacattccgactacagagccaaactcacccagatcagacagatctaccac
acggagctggagaaatacgaacaggcatgcaacgaattcactacccatgtgatgaacctg
ctgagggaacagtctcgcacgcggcccatctcccccaaagagattgagcgcatggtggga
atcatccaccgtaaattcagctccatccagatgcaactgaaacagagcacctgtgaggct
gtcatgatcctgcgctccagattccttgatgccaggcggaaaaggagaaacttcagcaag
caggcgacggaaattttgaacgaatacttctactcgcacctcagcaacccatatccaagt
gaggaggctaaagaggagctggcgaagaagtgcagcatcacagtttcccagggggtggga
agcaccatcacagtatcacaggtatccaactggtttggcaacaaaaggatccggtacaag
aaaaatatcggcaagtttcaggaagaagccaacctgtatgccgccaagaccgctgtaaat
gcagcacacgctgcagccgctgcagtgcagaacagccaggccaactcccctaccacacct
aactctggattccagatgaaagatgaagagtttcagctggattctgcagagagcaaaaac
actcttttaaccaacttgtttactggttcttcaggttcttttaacctcccaaactctggg
gacatgttcttgagcatgcagagtctgaatggggattcttaccaaggggcacaagtcgga
gccaatgtaaagtcacaggtggatactctgcgccatgttatcagtcagacggcaggatac
agtgatgcgcttcgggggaacacaatgtatagtccacatgggttaactgctaatggggga
tggcaagatgcaacgactccgtcttctgtaatatctccgacagaaggacccggaagtgtg
ctctccgatacctcaaattga
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