KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130196439
Entry
130196439         CDS       T09868                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pswi03400]
    130196439 (ercc6l2)
DNA repair and recombination proteins [BR:pswi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    130196439 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD VIGSSK HDA2-3 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 130196439
NCBI-ProteinID: XP_056274565
LinkDB
Position
7:complement(26954462..26968344)
AA seq 1556 aa
MASPSAVEKATWREGDTCLAPDPRDGSLRESTIKRLTSTSHDNGTTAWVVFTDHNKDEEE
EEEAVPVLKLMRPGVNHFTQEKPLFPSSVTDTSRCVPFVLSDVDGDRVPYTINRYLRDYQ
REGIRFIYNNYICSRGCILGDDMGLGKTVQVIGFLAAVMHKTGTWEDIENNRPQFLQSQM
PSKQSKPNKVFLIVAPLSVLYNWKDELDTWGHFQCVVVHGLKKEEELARIKKGRIEIALT
TYETLRLCMDQFNNIDWSAVVVDEAHKIKNPNSQITRAMKDLKCEIRVGLTGTILQNNLE
ELWCVMDWAIPGCLGNLGNFKNTFSDPIEQGQRHSATKRVLATGRKTARALVKKISCSFL
RRTKALIREQLPKKDDRVVYCSLTDFQETVYRTVLDTEDVTLMLRSSEKCDCQSGRTRGR
CCYKTNAAGVQMKGLYFSYLAILRKVANHTALLQSTAGSSKNQEKYVGAICEKVFQKFPD
FLQRRKDEAFEALSDPMYSGKMKVLQKLLTFYLQRRDKVLIFSLSTKLLDVLESYCMAEG
LDYSRLDGATKAKDRVQIVKEFNSSGHINLCLVSTMAGGLGLNFVGANVVVLFDPTWNPA
NDLQAIDRAYRIGQCRDVTVLRLISLGTVEEVIYLRQVYKQQLQCSVMDKESSRRYFEAV
QGRGVHKGELFGINNLFRLQTKGTCLTRKILEREGRVEAGVMTSRTHTGEEKEAETEAVG
EPADSLATDGPVPNNEQAEEKTSASKVSRGVLDFSSGSEEDEEEQGLKRKASSPSAMDGN
GGGNAVTGPGRMSLLQHGFSRLLERLKGKPELAEGDSSPAVDESPSEEEAEDQKMESTSS
GIAKNSKTRNRTACFPKLGPKTWDFSSSSDGEDPDNRDKKGQERFPLLRKSHDVRKTEDR
KGRANEKTPVAEESYEKATWNKNKPNKLKTPVPKVSRFEGYSDESDDLAVEAKTWPRRDA
LNSHGRRGRERPDRNRKRQSAGVRDEARLKYTEDIETFTSSDDEHTPVKKGRATGSRFTS
PPTERSRDESAKYSFTNLKNRTSPAGRDGTIDSVLGGVREVAYTHSNQRVVGGSKAEERI
SRAAARDVFESKMYSQLPANQLIGTQESLSASPPASPPRPPPPVRAQKPSVDHPVAFFSK
SVHRTGHATIIIGETPRAICRQQLEEMAEQFKFPSVHQFAVEILRGNSTRRLAWLREFYT
SLNLPDLADTVTNNFPQTSSSTVTSPTAFSTTAKSRAHTRTPRKDVPKPKHTEKNPEPKT
KPEPSRGVSVPRKKSRHPQNEDPEPQAKHRVPQNDVQKRQKFAKKNLLKPLSDVMSLESE
TACSARGHKRTERGSVSGSGGLGLDRASSSGLGSGKAAAFHNCTDRRIPSSADLSHGRSA
TLTKPAAQEGEKDPKTSSRTSEPFQGQRANSQTPPPPQRATSTSGRRSLLTDLIGDTSIL
DDLLKPKPRGAQRWGTAKSPPAYFTAPSPSRVALDTGSGSAGLTDSHRKHQVVPKGSRKD
FWDILIEGNEESINRLTDPAEVQRVCINTNFAARGRSEEEERKSLWKTNDKFLWKK
NT seq 4671 nt   +upstreamnt  +downstreamnt
atggcttcgccttctgcagttgaaaaagcaacatggcgtgaaggggacacgtgtctggct
cctgacccgagagatggctcccttcgagaatccaccattaaaagactgacttccacctct
catgataatggtaccacagcgtgggtggtattcacggaccataataaagatgaagaagaa
gaagaggaagctgtacctgtcttgaaactcatgagaccaggcgtgaatcacttcacccag
gagaaacctttgtttcccagcagcgtcacagacaccagccgatgtgtccccttcgtgttg
agtgatgttgatggggacagagtcccctacaccatcaacagatacctgagggattaccag
agagaaggaatccggttcatttacaacaattatatctgttccagaggttgtatcctgggg
gatgacatgggcctgggaaaaactgttcaggtcattggtttccttgccgctgtaatgcac
aaaacaggcacgtgggaggacatcgagaacaacaggcctcaatttctgcagagtcagatg
ccttccaagcaaagtaaacccaacaaagtgttcctcatcgtggccccgctgtcggtgctt
tataactggaaagatgagctggacacatggggccacttccagtgtgtagtggttcatggg
ctgaagaaagaggaggagctggctcgcatcaagaaggggcgcattgagatcgctctcact
acctatgaaactctgcgcctttgtatggatcagtttaataacatcgactggtctgctgtg
gttgtggacgaggcccacaagataaagaatccaaactctcagatcactcgggccatgaag
gatctgaaatgtgagatcagagttggcctcaccggcaccatcttacagaacaaccttgag
gagctgtggtgtgtcatggactgggccatacctggttgtcttggcaacttgggaaatttc
aagaacacgttttcggatccgattgagcaagggcagaggcacagtgcaaccaaacgtgtc
ctagcgacagggaggaagaccgccagggccctggtgaagaagatctcctgctcgttcctc
agaaggacgaaagctctcatcagggaacaactgccgaaaaaagacgacagggtggtgtat
tgctctctgacagactttcaggagactgtgtatcggacggtgctggacactgaagacgtg
acgttaatgctgaggtcttcagagaaatgcgactgtcaaagcggacgcacccgcggcaga
tgctgctataaaacaaatgcggcaggtgtgcaaatgaaggggctgtacttcagttatttg
gccatattgaggaaggttgccaaccacacagcactgcttcagtccacggcaggctccagc
aagaaccaggagaagtacgtgggggccatctgtgagaaggttttccagaagtttccggac
tttttgcagagacgcaaagacgaagcatttgaagctttgtcggacccgatgtacagtgga
aagatgaaggttttgcagaagctgctgacattttacctgcaaagaagagataaagtgctt
attttttctctctcaaccaagctgttggatgtgctggagagctactgcatggcagagggg
ctggactacagcaggttggacggagccaccaaagccaaagacagagtccagattgtcaaa
gagttcaacagctccggtcacatcaacctctgcctggtttccaccatggcgggtggtctc
ggtcttaacttcgtcggggccaatgtggtcgtgctcttcgaccccacgtggaacccggcc
aatgaccttcaagcgatcgacagggcgtatcgtattggccagtgcagggacgtgactgtt
ctcaggctgatctcattggggactgtggaggaggtcatctacctcagacaagtgtacaaa
cagcaattgcaatgttccgttatggacaaggagagttcgcggcggtactttgaggcggtg
cagggccgcggtgtccacaagggggagctgtttgggatcaacaacctcttccggctgcag
accaaagggacatgcctgacccgcaagatactggagcgagaaggacgagtggaggccggc
gtgatgaccagccgcacgcacacgggcgaagagaaggaggcggagacggaggcagttggc
gaacctgcagactctctggctacagacggcccagtgccgaataatgagcaagccgaggag
aagacgagtgcatcgaaggtctccagaggggtgttggacttcagcagtgggagtgaagag
gatgaggaagagcagggtctgaagaggaaggcgtcaagccccagtgcaatggacggcaac
gggggtgggaatgctgtaacgggtcctggtcgaatgagtctcctccagcacggtttctcc
aggctcctcgaaaggctcaaaggaaaaccagagttggcagaaggggacagtagtccggct
gtcgatgaaagcccctcagaggaagaagctgaggatcaaaagatggagagtacctcctct
ggcatcgccaagaactccaaaactagaaatcgcacagcctgtttccctaaattgggaccc
aaaacgtgggacttctctagcagttcagacggagaagacccggacaatagagataagaag
ggacaagagaggtttcctctgttaagaaaaagtcatgatgtaagaaagacggaggaccgt
aaagggcgggcaaatgagaaaactccagtggccgaggaaagttatgaaaaagccacatgg
aacaaaaataaacctaacaagctcaaaactccagttccaaaagtgagccgctttgagggc
tactccgatgaatctgacgacttggccgtggaggcaaagacgtggcccaggagggacgct
ttgaattcacatggtcgccgcgggagagaaaggcccgaccgcaacagaaagaggcaaagc
gctggcgttcgagacgaggccagattgaaatacacagaagacatcgagacgttcacgtct
tcagacgacgaacacaccccggtgaagaaggggagagcgacgggaagtcgcttcacatcg
ccgccgacggaaagatcccgagatgagtcggcgaaatattcatttacaaatctaaagaat
cggacgtcccccgcgggaagggatggaactatcgacagtgtgctggggggcgtacgcgag
gtggcgtacacccactctaaccagcgcgtggtgggcggcagcaaagcggaggagaggatc
agcagagcagctgcgcgagacgtgtttgagagcaagatgtactcccagctgccggccaat
cagcttataggcacccaagagagcttgtcggcgagcccaccagccagtccgccgcgcccc
ccccctcctgtcagagcgcagaagcccagcgtggaccatccggtcgccttcttcagcaag
agtgtgcaccgcaccggacacgccaccatcatcatcggagagactccccgggccatatgc
aggcagcagctggaggaaatggcagagcagttcaaattcccctcagtccaccagtttgca
gtggagattctgagaggaaactcaacccggagactggcctggctacgggagttttacact
tcactgaaccttcctgacctggccgacaccgtcacaaacaacttcccacagacctcctct
tcaactgttacctccccgacagccttcagcaccaccgcaaagtctcgcgcgcatacccga
accccacggaaggatgttccaaagcctaaacacaccgagaagaatcccgaacccaaaact
aagcctgaaccctcgcgcggtgtttccgtgccacggaagaaatctcgccacccacagaat
gaggatcccgaaccccaggcgaagcacagagtaccacaaaatgatgttcagaaacggcaa
aagttcgcgaaaaagaatttgctaaaacctctaagtgatgttatgagcctcgagtccgag
acggcctgcagtgccagaggacataagaggacagagaggggtagtgtttctggttctggt
ggtcttggcttggatcgggccagcagcagtggtctggggtctgggaaggccgcagctttc
cacaactgcacagacagacgaatcccttcttctgcggacctcagccacggcaggtccgcc
acattaaccaaacccgcagcacaggaaggggagaaagacccgaagacgtcctccaggact
agtgaaccctttcagggccagagagcgaattctcagacgcctcctcctcctcaacgggcc
acgtccacctccggtcgtcgttccctcctcacagatctgataggggacacgtcgatcctc
gacgatctgttaaaacccaaacccaggggcgcgcaacgatggggtaccgcgaaatcgccc
cccgcgtacttcacggccccttctccatccagagtcgctctcgataccggttctggttcc
gcaggcctcacagactctcaccgcaaacaccaggtggtaccgaagggcagtcgcaaagac
ttctgggatatcctgatcgagggtaatgaggagagcatcaaccggttgacggacccggcg
gaagtgcagagggtttgcatcaacacaaactttgcagctcggggtcggtccgaagaagag
gagaggaagagtctctggaagacgaacgacaagttcctgtggaagaagtga

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