Pseudoliparis swirei (Mariana hadal snailfish): 130196564
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Entry
130196564 CDS
T09868
Symbol
rchy1
Name
(RefSeq) RING finger and CHY zinc finger domain-containing protein 1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04115
p53 signaling pathway
pswi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130196564 (rchy1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
130196564 (rchy1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130196564 (rchy1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130196564 (rchy1)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130196564 (rchy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_2
Prok-RING_4
zf-RING_UBOX
zf-RING_4
zf-RING_11
Zn_ribbon_DUF2089
Motif
Other DBs
NCBI-GeneID:
130196564
NCBI-ProteinID:
XP_056274795
LinkDB
All DBs
Position
7:10393293..10397926
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AA seq
279 aa
AA seq
DB search
MASPAGCEHYVRSCLLKAPCCGKLYVCRLCHDAEENHQMDRFKVTEVQCTDCQTVQQAQQ
TCQECDAQFGEYYCDICHLFDKDKKQYHCQPCGICRIGPRGKYFHCEKCNLCLAQDLRGN
HKCVENVSRQNCPVCMEDIHTSRIGAHVLPCGHLLHKTCFDDMVRTRVYRCPLCMHSAWE
MEDYWDQIDKEIAQSPMPTEYQGATVKIICNDCQAHCTAPFHVLGMKCSDCGSYNTAQDG
GLIQQPQQQQQSEQEPEENEAETDTEPELQDQPQLPTPD
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccctgccggttgtgagcattatgttcgcagctgcttattaaaagcaccttgc
tgtggtaaactgtatgtgtgtcggctgtgccatgatgcggaggagaaccaccagatggat
agattcaaagtcacggaggtgcagtgcaccgattgtcagacagtgcagcaggcacagcag
acttgccaggagtgtgatgcgcagtttggggagtattactgtgacatttgccacttgttc
gataaggataagaagcagtaccactgtcagccctgtggaatatgcaggattgggcccagg
gggaagtatttccattgtgagaagtgcaatctgtgtttagctcaggatctgcggggaaac
cacaagtgtgttgaaaatgtctcgaggcagaactgccctgtgtgtatggaggatattcac
acgtccagaattggtgcacacgttcttccatgcggccatcttttacacaaaacctgcttt
gatgacatggtcagaacaagagtgtatcgctgtcccctatgtatgcactctgcctgggaa
atggaagactactgggaccagatagacaaagagattgcccaatcaccgatgcccactgaa
taccagggtgcaactgtcaaaattatatgtaacgactgccaagcccactgcacagcgcct
tttcacgtgctggggatgaagtgcagcgactgtggctcctacaacactgcccaggatggg
ggactcatccagcagcctcaacaacaacagcagtcagagcaggaacctgaggagaatgag
gcagaaacggacacagagccagagctgcaagatcagcctcagttgcccacgccagattaa
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