Pseudoliparis swirei (Mariana hadal snailfish): 130196568
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Entry
130196568 CDS
T09868
Name
(RefSeq) CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1-like
KO
K00780
beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4A) [EC:
2.4.3.2
2.4.3.4
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00512
Mucin type O-glycan biosynthesis
pswi00533
Glycosaminoglycan biosynthesis - keratan sulfate
pswi00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pswi00604
Glycosphingolipid biosynthesis - ganglio series
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
130196568
00533 Glycosaminoglycan biosynthesis - keratan sulfate
130196568
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
130196568
00604 Glycosphingolipid biosynthesis - ganglio series
130196568
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130196568
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.3 Sialyltransferases
2.4.3.2 beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3-sialyltransferase
130196568
2.4.3.4 beta-galactoside alpha-2,3-sialyltransferase
130196568
Glycosyltransferases [BR:
pswi01003
]
Terminal extension
Sialyltransferase
130196568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_29
DUF6794
dGTP_diPhyd_N
FtsK_4TM
Motif
Other DBs
NCBI-GeneID:
130196568
NCBI-ProteinID:
XP_056274803
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Position
1:complement(17387092..17405261)
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AA seq
356 aa
AA seq
DB search
MLLGRRRSLCSLFGLSSDSMSLPRRRQIRTLALLFCVITFTTFLFSYTLRDPSLDFFKYA
SRLSDNLFFSSGGPCACRRRCMTEAEDDPWFAERFNRSVRPLMTRENSVLSDDTFKWWQW
LQSERQPANFSEVVDQLFRVVPDEVQYVDAGPKRCRSCSVVGNSGNLKGAHYGGLIDSCD
LVIRMNQAPTAGYEEDVGARTTHHVMYPESAVDLDNGTSLVLVPFKTLDLQWIISALTTG
TITHTYTPVASRIKANKDKVLIYNPTFFKYVYESWLEGHGRYPSTGFLSLMLAVHICDEV
TVFGFGADQYGNWHHYWEENTLSGAFRHTGVHDADHEYNVTLQLAEKHKIQLFRGR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcggacgccggcgatctctctgttcccttttcgggctctcctctgacagcatg
tctctccccaggcggaggcaaatcaggactttggctctgctgttctgcgtcatcaccttc
accacgttcctgttcagctacactctcagggacccgtcgctcgacttcttcaagtacgcc
tcccgcctgtcggataacttattcttctcctccggggggccgtgcgcctgccgccggcgg
tgcatgacggaggcggaggacgacccctggttcgccgagcgcttcaaccgctccgtccgc
cccctgatgaccagggagaacagcgtgctgtcggacgacacctttaaatggtggcagtgg
ttgcagtcggagaggcagccggccaacttctccgaggtggtggaccagctgttccgggtc
gtccccgacgaggtgcagtacgtggacgccgggcccaagcgctgccggagctgctccgtg
gtggggaactccgggaacctgaagggggcgcactacggaggcctcatcgactcctgcgac
ctcgtcatcagaatgaaccaggcgcccaccgccgggtacgaagaggacgtgggcgccagg
acgacgcatcacgtcatgtatccagaaagcgccgtcgacctggacaacggcaccagcctg
gtgctggtccccttcaagactctggacctgcagtggatcatcagcgccctgaccacgggc
accatcacgcacacgtacacgccggtggcgtccaggatcaaggcgaacaaagacaaggtg
ctgatttacaatccgacgtttttcaaatacgtctacgagtcttggctggaaggtcacggg
cgatacccgtccaccggcttcctcagcctgatgctggccgtgcatatctgtgacgaggtc
acggtgttcgggttcggggcggaccagtacgggaactggcaccactactgggaggagaac
acgttgtccggagccttccgacacacgggcgtccacgacgcagaccacgagtacaacgtc
accctgcagctggcggagaagcacaaaattcaattgtttcgagggagatga
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