KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130196697
Entry
130196697         CDS       T09868                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010  MAPK signaling pathway
pswi04137  Mitophagy - animal
pswi04141  Protein processing in endoplasmic reticulum
pswi04210  Apoptosis
pswi04217  Necroptosis
pswi04621  NOD-like receptor signaling pathway
pswi04622  RIG-I-like receptor signaling pathway
pswi04920  Adipocytokine signaling pathway
pswi05132  Salmonella infection
pswi05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130196697
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    130196697
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    130196697
  09143 Cell growth and death
   04210 Apoptosis
    130196697
   04217 Necroptosis
    130196697
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    130196697
   04622 RIG-I-like receptor signaling pathway
    130196697
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    130196697
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    130196697
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130196697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130196697
   04121 Ubiquitin system [BR:pswi04121]
    130196697
Enzymes [BR:pswi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130196697
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     130196697
Ubiquitin system [BR:pswi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    130196697
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_4 zf-C3HC4_2 zf-RING_5 zf-C3HC4_4 Sina_ZnF zf-RING_6 MATH zf_C2HC_14
Other DBs
NCBI-GeneID: 130196697
NCBI-ProteinID: XP_056274995
LinkDB
Position
7:29774875..29799089
AA seq 569 aa
MAAQEQSPPSSLEGNKPGFPKKILANSLEDKHLCNSCQKVLRRPLQAQCGHRFCSFCFNK
IVSSGPQKCSACIKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCPNEGCTWTGSIKE
FEAGHEGKCDFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHVKFCSKCKAPCRFHVVGCDASVEKEKLHDHERQCS
YEHLNLLLHFIMGIKVSLESLQPQSLEVAGHKLQELHRSLRDLELKMSQMGGAAAAAGAL
ATPPAAACAPRPAVAFTPLPSAALQLWSEKAKVAELSRRCLELEVKVGTFENIVCVLNRE
MERSCATMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSVVEMEGKMREMSAATYDG
IFVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFV
VMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDVSSSSFQRPVSDMNIASGCPLF
CPLAKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggctgcacaggagcagtctccaccatcttccctggaaggcaacaaacccggcttcccg
aagaagattttggccaacagcctcgaggacaagcatctgtgcaactcgtgccagaaagtg
ttgaggaggcccttgcaagcacagtgcggacaccgcttttgttcgttctgtttcaacaaa
attgtgagttccggcccacagaagtgcagcgcttgtatcaaagaagacttgtttgaggaa
cccacctccattctcaagcaaggcggtgctttccccgacaatgcggcccggagagaagtg
gaggccctggcggccgtctgtcccaacgaaggctgcacctggacgggcagcatcaaagag
tttgaggccggccacgagggcaagtgtgacttcatgatcatcctgtgtccgtcctgcaaa
gagctgatgagggccaacgagcaggagcgccacaacgagagggaatgtccggagaggacg
ctcaactgcaaatactgcaaggaacccttcctgttgaagaacatcaaggctcacgatgaa
atctgtccaaagtacccgatgatttgcgaaggctgtgcgaagaaaaagatccccagagaa
aagtatgtggaccatgttaagttctgcagtaaatgtaaagcaccgtgcagatttcatgtt
gttggctgcgatgcgtctgtggagaaggagaagctgcacgaccacgagcgccagtgttcc
tacgagcacctcaacctgctgctgcacttcatcatgggcatcaaggtgagcctggagagc
ctgcagccccagagcctggaggtggccggccacaagctgcaggagctccaccgctccctc
agggacctggagctgaagatgagccagatgggcggggccgcagcggccgccggcgccctc
gccacccccccggcggcggcgtgcgccccgcgtccggccgtcgccttcacgccgctgccc
agcgccgcgctgcagctctggagcgagaaggccaaggtggcggagctgagccgccgctgc
ctggagctggaggtcaaagtgggcacgttcgagaacatcgtgtgcgtcctcaaccgcgag
atggagcgctcctgcgccaccatggaggcctacaaccggcagcaccggctggaccaggac
aagatcgagatcctcaacaacaaggtgcgtcagctggagcgcacggtgagcctgcgggac
ctctccgtcgtggagatggaggggaagatgagggagatgtcggcggctacgtacgacggc
atcttcgtctggaagatctccgacttcaccaagaagaggcaggacgccgtggcgggccgc
gcccccgccatgttctcccccgccttttacaccagcaaatacggctacaagatgtgcctg
aggatctacctgaacggagacgggacgggccgcggcacacacctgtccctgttcttcgtg
gtgatgagaggccacagcgacgcgctgctcaagtggccttttaaccagaaggtcaccctg
atgctgctggaccagaacaacagggagcacatcatcgacgccttccggcccgacgtctcc
tcctcgtccttccagaggcccgtcagcgacatgaacatcgccagcggctgcccgctcttc
tgcccgctcgccaagctggactccaagaactcctacatacgcgacgacaccatcttcatc
aaggccattgtggacctcactgggctctag

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