Pseudoliparis swirei (Mariana hadal snailfish): 130197721
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Entry
130197721 CDS
T09868
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130197721 (tcf3a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
130197721 (tcf3a)
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Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
130197721
NCBI-ProteinID:
XP_056276534
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Position
8:complement(13273919..13303131)
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AA seq
631 aa
AA seq
DB search
MAAVETDKELNDLLDFSAFVSFQMFEPPVSNGKNRPTTLASSQFGGSGMDDRSGSGPWGP
AEQNSPSFNQGRGYAEQGLYNEQEGIASAPMYGSGIVGKAERGPYSSFTAQPGFMPSEMP
MPSPDALSPSGLKSNSQFYSSYEGSNSRRRPSQEPIGPQPKKIRKVPPGLPSSVYASASG
EDFNRDNAGYPVSKAGNVFPPPFYVQEGLHPPSDPWGSARSMVQPGYSAMLGNSPHLSQH
APFTAINPQDRLKRQPLPLSPQNFPMHGSEVNGTHPSGFHSGPSSFGVPSHTPPMADPVM
ANQGTAPGSSGEEIGKALASIYPSDPQSNTFPPSPSTPSGSPQAVSGSASQWTRSSGQAT
PSPNFEGGIQSMPSKMEDRLDEAIHVLQRHASGQGVPGLAEMHNLLSSGLGLPPAFTSAA
LGLASRVTGLMSGHHEESAGLPSSGGLVHGHHGPTSVQPGSQPEGFTGLSGSLKRSSGSD
IKREDKEDDENCSITDRSEDEIKDMKDRLGSSLDDEEDDEDLPVEVKAEREKVRRMANNT
RERLRVRDINEAFKELGRMCQLHLSHEKPQTKLIVLQQAVNVILNLEQQVRERNLNPKAA
CLKRREEEKVSGVDPQMLGGGHPGLGGDGHM
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtggaaacagacaaggagctcaacgacttgctggattttagcgcgtttgtc
tcttttcagatgtttgagcctccagtttcaaacggcaagaaccgtccgactactctcgcc
agcagtcagtttggaggttcgggtatggatgacaggagtgggtccggtccctggggccca
gcagaacagaacagtccatctttcaaccagggaaggggttatgcagaacaaggcctttac
aatgagcaagagggcattgcctcggcccccatgtatggatcagggattgttgggaaggct
gagcgaggaccatactcgtcatttacagcacagccgggctttatgcccagtgagatgccc
atgcccagtcctgatgccctctccccatctggcctgaagtccaactcccagttttattcc
tcctatgagggaagcaactctcgcaggagaccctcacaggagcctattggaccacaaccc
aaaaagatccggaaggtgccccctggcctgccctcctcggtttatgcatctgcctcagga
gaggattttaacagggacaatgctggctacccggtctccaaggcaggaaacgtcttccca
ccaccgttctatgtgcaagaaggcctccacccgccctctgatccatggggctctgccagg
tcgatggttcagcctggttattctgccatgctgggcaattccccccatctgagccagcat
gctcccttcactgccatcaacccccaagacagactgaaacggcagccgctgcccctctct
ccccagaacttccccatgcatggcagtgaggtgaacgggactcatccctctggcttccac
tctggccctagcagctttggagtccccagccacacaccccctatggctgaccctgttatg
gccaatcaaggaacagcacctgggagttcaggagaagaaattggaaaagccctggcatct
atctacccttcagacccacagagtaacaccttcccaccgtctccatctactccctccggc
tctccccaggctgtttcaggctctgcatcacagtggactcggtcctctggccaggccaca
ccgtcacccaactttgagggtggaattcagtccatgccgagtaaaatggaggaccgtctg
gacgaagccatccatgttctacagcgtcacgccagcggacaaggagtgccaggcctggct
gagatgcacaatctgctctcgtctggcttagggttacctccagccttcaccagtgcagca
cttggattggccagtcgcgtgactggattgatgtctggtcaccacgaggagtctgctggt
ctgccctctagtggcggactggtgcatggtcaccacggccccacatctgtccagccaggc
tctcagcctgaaggttttacaggcctctctggtagcctgaagcgctccagtggttctgat
atcaaacgagaggacaaggaggacgatgaaaactgctcaatcaccgacaggtcagaggat
gagataaaagacatgaaggatcggcttggatcaagtctggatgatgaggaagacgatgaa
gatctaccagtggaggttaaggctgagcgggagaaagtgaggaggatggcaaacaacacc
cgtgaacgactacgtgtgcgggacatcaacgaggcttttaaggagctgggccgcatgtgt
cagctccatctgagccacgagaaaccgcagaccaaattgatcgtactgcaacaggccgtt
aacgttatactcaacctggagcagcaagttcgagagcgtaatttgaacccaaaggccgcc
tgcctcaagaggagagaggaggaaaaagtgtcaggcgttgacccccagatgcttggtggg
ggtcaccctggtcttggaggagatggacatatgtga
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