Pseudoliparis swirei (Mariana hadal snailfish): 130198577
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Entry
130198577 CDS
T09868
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
pswi04520
Adherens junction
pswi04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130198577
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130198577
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130198577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Tc-R-P
PTP-SAK
V-set
DSPc
Fn3_VIN3
C2-set_2
Y_phosphatase3
PTPlike_phytase
Fn3_PTPRU
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
130198577
NCBI-ProteinID:
XP_056277759
LinkDB
All DBs
Position
8:complement(7429605..7586735)
Genome browser
AA seq
1910 aa
AA seq
DB search
MGPNRHRAVPLLLLLSCTVFSSQADTVPSFLKSPEDQTGISGGVASFVCQATGEPKPRIT
WMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNNDGEISTSAKLTVL
EENQVPHGFPTIDMGPQLKVVEKTRTATMLCAASGNPDPEITWFKDMLPVDISSSNGRMK
QLRSGALQIENSEESDQGKYECIAMNSAGTRYSSPANLYVRVRRVPPRFSIPPTNQEVMP
GGSVNLTCVAVGSPMPYVKWTMGQLELTKEEEMPLGRNVLEVINIRESANYTCVAISSLG
MIEATAQVTVKALPKPPTSLIVTETTATSVTLTWDSGNPEPVSYYMIQYRAKSSDNGFQE
VEGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPQSDPVETRTGEQAPSSSPVHVQARML
SASTMLVQWESPEEPNGQIRGYRVYYSSDLTAPLSAWQKHNTDDSSLTTISSLTPDITYS
LRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELDSRIMLTWLWPVQDPITLYEL
QYWETGSENKIHVTFNLAGSYAVDGLKPDTLYHFSLAARSEMGFGVYTQPIEARTAQSTP
SAPPQDVHLVSLSSTSLKVSWVAPPAASRHGAIVRYTVSYQALAGEDTERHEVVGIGVDV
TSYLLEGLEKWTEYQVWVRAHTDVGPGPESAPVRMRTKEDVPGAPPRRLEVEAINSTAIR
VTWKPPLQAKHHGQIRGYQVIFSRLEHGEPRGQPNIMDIALPEAQWNIEESTEHEAIIVG
LHSETTYSVTVAAYTTKGDGARSKAKVITTTGAVPGKPTMIISTTMGNTALIQWQPPQEM
VGELVGYLLQYKRTDEENYNARELKKTDDHYTVTGLHKGATYVFRLSARNRAGSGEAYAK
EISTPEDMPSGFPFNLQVTGLTQSSTQLTWEPPLIAERNGKIVHYVVVYKDINSHQNSTN
RTGDTRMTIQGLNPDTTYDIRVQAFNSKGGGPLSPSIQSRTMSNDFPTLNFGVKAVMKTS
VLLTWDLPLNYKSQVPFKILYNQQSVEVQGNLKRKLIAQLQPDTDYSFVLTSRGNIAGGL
QQQVSIRTAPDLIKTKPSTYQAQGGKMTINLPTVQTTTRVRWYYIVVMPVSQSTRRWKNP
DEMDLDELLRSSEGPALRRRRHLDSSQPYIAAKLASLPATFTVGDEKRYNGFHNKPLTSS
QEYLCFVLAVLRYEGTDSTANYMTFSASPYSDPIQVTTTMSQGMEQPEMLWVMGPVLAVV
LIIIIVIAILLFKNSKQERKRASPLPKDDHSGGVKDSLLANSSDPVEMRRLNYQTPGPSS
HHCPNTPRMKEHPPIPVTEMADHMERLKANDGLRFSQEYESIDPGQQFTWENSNMEVNKP
KNRYANVIAYDHSRVVLTSVDAVPGSDYINSNYIDGYRKQNAYIATQGPLPETLSDFWRM
VWEQRSNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVELATYSVRTFALYK
NGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPSDAGPMVVHCSAGVGRTGC
FIVIDAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAATCGNTEVPA
RNLYAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISANLPCNKFKNRLVNIMPFE
STRVCLQPIRGVEGSDYINASCIDGYRQQKAYLATQGPLAETTEDFWRMLWEHNSTIIVM
LTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQ
FQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLE
RMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggggccgaaccgtcaccgggcagtgcccctcctgcttctactcagctgcacagtgttc
tcctcgcaggcagacaccgtgccaagtttcctcaaatcccccgaggaccagacgggcatc
tcgggaggagttgcgtcgtttgtgtgccaggccaccggggagcccaaacccagaatcacc
tggatgaagaaaggcaagaaagtcagctcccagcgctttgaggtgattgagtttgatgac
ggctcgggctccgtcctgcggatccagccactgcgcacacacagagacgaagccatttac
gagtgcaccgccaccaacaacgatggcgagatcagcaccagtgccaagcttaccgtgctt
gaagagaaccaggtgccccatggcttccccaccatcgatatgggtccccagctgaaggtg
gttgaaaagaccagaacggccaccatgctgtgtgccgccagcggaaacccggacccagag
ataacatggttcaaggacatgctgcctgtggacatcagcagcagcaacgggcgcatgaaa
cagcttcgttcaggggctctgcaaattgagaacagcgaggagtcggaccaagggaaatat
gaatgcattgccatgaacagtgccgggacccgctactcctcacctgccaatctctacgta
cgagtgcggcgagtcccacccagattctcaattccacccaccaatcaggaggtgatgccg
ggcggcagcgtcaacctgacgtgcgtggcggtgggctcgccgatgccctacgtcaagtgg
acgatgggccagctggagctgacgaaggaggaagagatgcctttgggacgcaacgtgctg
gaggtcatcaacatccgcgagtcggccaactacacctgtgtggccatctcctctctgggc
atgatcgaagccaccgctcaggtcactgtcaaagccttgccaaagccccccacctccctc
attgtaaccgagacaacagccaccagtgtgactctcacctgggactctggaaacccagaa
cccgtctcctactacatgatccagtacagagccaagtcctcagacaatggcttccaggaa
gtggaaggtgtggccacgacccgatacagcatcggtggactcagcccctactccgagtac
gagttccgtgtcatggctgtcaacaacattggccgcgggccgcagagcgaccctgtggag
acgcgcaccggtgaacaggccccctcctcgtcgcctgtgcacgtccaagcgcgcatgctg
agtgccagcacaatgctggtgcagtgggaatcgcccgaggaacccaacgggcaaatcagg
ggctaccgggtctactacagctcggacctgacggctccgctcagcgcgtggcagaagcac
aacaccgacgacagcagtctgacgaccatctcgagcctgactcccgatatcacctacagc
ctcagggtgctgggcttcacctcggtcggggacgggccaccttctgacgtcctgcaggtc
aaaacccagcagggagttcctgcccagccgtccagctttgaggccgaagccgagctggac
agccgcataatgctaacatggctgtggcccgtgcaggaccccatcacgctgtatgagctg
cagtactgggagacgggctcagagaacaagatacatgtgaccttcaacctagctggttcc
tatgctgttgatggtctcaagcctgacaccttgtaccacttctcactggcagcccgctct
gagatgggcttcggcgtctacactcagcccatcgaggctcgcaccgcccagtccacccca
tccgccccccctcaggatgtacatctggtcagcctgagctccaccagcctcaaggtgagt
tgggtggccccgcccgccgctagccgccacggcgccatcgtgcgctacacagtcagctac
caggccctggctggggaggacacggagcgccatgaggtggtgggcatcggtgtcgacgtc
accagctatttgctggaaggcctggagaagtggactgagtatcaggtgtgggtgagggca
cacaccgatgtgggcccgggccctgagagtgccccggtgaggatgaggaccaaagaggat
gtgcctggagcaccacccaggaggctcgaggttgaggctataaactccacggcaatccgg
gtgacctggaagccgcccctgcaggcgaagcatcacgggcaaatccggggctaccaagtc
attttctctcggcttgaacacggtgaaccgcgaggccagccgaacatcatggacattgct
ttgccagaggcacagtggaatattgaggagtccaccgagcatgaggccattattgttgga
ctgcactctgaaaccacctactctgtcactgtagcagcctacaccaccaagggagacgga
gctcggagcaaagctaaagtcatcaccacgactggtgcagtgccaggcaagcccactatg
attatcagcaccaccatgggcaacacagcgctgatccaatggcaacccccgcaggaaatg
gtgggtgagctggtgggctacctgttgcagtacaagcgcaccgatgaggaaaactacaac
gcacgcgagctaaaaaagaccgacgaccattacaccgtcaccgggctgcacaaaggcgcc
acctacgtcttccgtctcagcgcccgtaaccgcgcaggcagcggcgaggcctacgcgaag
gagatcagcacccctgaagacatgccctcgggcttcccgttcaaccttcaagtcacagga
ctgacccagtccagcacccagctgacctgggagcccccgctgatagctgaaaggaacggg
aagatcgtccactacgtggtcgtgtacaaggacatcaacagtcatcagaacagcacaaac
cgcacgggcgacacgcgcatgactatccagggcctcaaccctgacaccacctacgacatc
cgggtacaggccttcaacagtaagggcgggggacccctcagccccagcattcagagcagg
accatgtccaacgattttcccaccctgaattttggtgtcaaagcagtcatgaagacgtcg
gtcctcctcacctgggatttgccactgaactacaaatcccaagtacctttcaagatcctg
tacaaccagcagagcgtggaagtgcagggaaacctgaagaggaagctgatcgcgcagctg
cagccagacacagactactcctttgtgctgacaagcaggggcaacattgctggaggtctg
cagcagcaggtgtccatccgcactgcccctgacctgatcaagactaagcccagcacatat
caggctcagggtggcaagatgaccatcaacctgcccacggtccagaccaccacacgcgtc
aggtggtactacatcgtggtgatgccggtgtcccagtcaacccggcggtggaagaatcca
gacgagatggacctggacgagctgctcaggtcgagtgaaggccctgccctgaggcgccgc
cgtcacctggattcctcccagccttacatcgctgccaagttggcctcactgcccgccacc
ttcaccgtgggtgatgagaagaggtacaacggcttccacaacaagccgctcaccagttcg
caggagtacctctgcttcgtcctggccgtgctccgatacgaaggaacagacagcactgca
aattatatgacattctccgccagtccctactcggacccaatccaggtcacaacaacgatg
tctcaggggatggagcaacccgaaatgttgtgggttatgggcccagtgctggctgtggtc
ctcatcatcatcatcgtcatcgccatcctgctctttaagaacagcaaacaggaaaggaag
cgggcgtctcccctacccaaagatgaccactcaggtggggtgaaagactccctgctggcc
aactcctctgaccccgtggagatgagaagactcaactaccagaccccaggtcccagctct
catcactgccccaacactccaagaatgaaggagcacccgcccattccagtcacggaaatg
gctgaccacatggagcgactgaaggccaacgacggcctccgcttctcccaggagtacgag
tccattgatccaggccagcagtttacctgggagaactccaacatggaggtcaacaagcca
aagaatcgctatgcaaacgtcattgcctatgaccactccagagtggtgctcacctctgtt
gacgccgttccaggcagtgactacatcaattccaactacatcgacggctacaggaagcag
aatgcctacattgccacacaggggccactgccggagactctgagcgacttctggaggatg
gtgtgggagcaaagatccaacaccatcgtcatgatgaccagactggaggaaaagtcacgg
gtgaagtgtgaccagtactggccgtcgcgaggcacagagacctatggaatgatccaggtc
accatgctggacacggtggagttggccacttacagcgtccggactttcgccctctacaag
aacggctccagtgagaagagggaggtgagacagttccagttcatggcgtggccagaccac
ggggtgccagagtaccccacccccattctggccttccttcggagggtaaaagcctgcaat
ccgtcagatgcagggcccatggtggtccactgcagtgcgggcgtgggcaggaccggctgc
ttcatcgtgatcgatgccatgctggagcgcatgaagcacgagaagtccgtggacatctac
ggccacgtgacgtgcatgcgtgcccagaggaactacatggtccagaccgaggaccagtac
atctttatccacgaagcgctgctggaggccgccacctgcggcaacaccgaggttccggca
cgcaacctgtacgcccacatccagaagctcacccagcccccgcccggcgagacggtgact
gccatggagttggagttcaagagactggccaactccaaagcgcacacgtcacgcttcatc
agcgccaatttaccgtgcaacaagttcaagaaccgcctggtcaacatcatgccttttgag
tccacccgcgtctgcctgcagcccatccgtggggtcgagggctccgactacatcaacgcc
agctgcatcgacggctacaggcagcagaaggcctacctggcaacacagggccccctggcg
gagaccaccgaggacttctggaggatgctgtgggagcacaactccaccatcatcgtcatg
ctcaccaagctacgagagatgggacgggagaagtgccatcagtactggccagcggagcgc
tcagccaggtaccagtactttgtggtggatccaatggccgagtacaacatgccccagtac
atcctcagagagttcaaagtcacagatgccagggacggccagtccagaacaatccgccaa
ttccagttcactgactggcctgagcaaggagttccaaaaactggagaaggcttcattgat
ttcattggacaggttcacaaaaccaaggaacagtttggacaggacggaccaatcactgtc
cactgcagtgccggggttggcaggaccggagtcttcatcaccctcagcatcgtgctggag
aggatgcggtacgaaggcgtggtcgacctcttccagacggtgaagacgcttcgcacccag
cggcccgccatggtgcagaccgaggaccagtaccagttgtgctacagggcagcgttggag
tacctggggagctttgaccactatgcaacataa
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