Pseudoliparis swirei (Mariana hadal snailfish): 130199340
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Entry
130199340 CDS
T09868
Name
(RefSeq) F-box only protein 6-like
KO
K10100
F-box protein 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130199340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130199340
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pswi04091
]
130199340
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130199340
Lectins [BR:
pswi04091
]
F-box lectins
130199340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FBA
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
130199340
NCBI-ProteinID:
XP_056278722
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All DBs
Position
9:21130770..21134114
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AA seq
264 aa
AA seq
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MGATQSSAPAAGPSEEHLFPVPLDILEEIFLNLPAQQVVCVCRLVCRQWGQVADIESLWR
ERCRREGYRLREASRTPKDWRLFYFLCKKRRNLLKNPKGEDKMKNWQILENGGDQWKVED
VLVPHPNETVQQTFVTSYEMCRKSQLIDLWVEGYNSLFMDHFQPAIKISDWYAPRWDCGS
EYEIRVELLNRRKKAVRTFAPDTVHFEQWNDHPWNQMTHVFQDYGPGVRYVRFSHGGKDT
QFWAGWYGIRVTDSCVEICPAVDA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaacccagagctcggctccagctgcaggaccctcagaagaacacctgttcccg
gttcctctggacatcctggaggagatcttcctgaatctccccgcccagcaggtggtttgt
gtttgccggttagtttgccgtcagtgggggcaagtggccgacattgagtctctgtggaga
gagagatgtcgaagggagggataccgcctccgcgaggcctccagaacccccaaagactgg
cggttgttttacttcctgtgcaagaagaggaggaaccttctcaagaatccgaaaggagaa
gataaaatgaagaactggcagatacttgagaacggcggcgaccagtggaaagtggaggac
gtgttggtgccacatccgaatgagacggtccagcaaacctttgtcacgtcttacgagatg
tgcaggaaatcgcagctgattgatttgtgggtggaaggttacaactcgttgtttatggat
catttccagccagccatcaaaatatctgattggtacgccccgcgatgggattgtggcagc
gaatatgagatccgggtggagttgctgaatcgaagaaagaaagcggtgcggacgttcgct
cccgacaccgttcacttcgagcagtggaacgatcatccgtggaatcagatgacccatgta
ttccaggactatggaccaggagtgaggtacgtccgtttctcccacggaggcaaggacacg
cagttctgggccggatggtacgggatacgtgtcaccgacagctgtgtggagatatgtcca
gcagtggacgcgtag
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