Pseudoliparis swirei (Mariana hadal snailfish): 130199456
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Entry
130199456 CDS
T09868
Symbol
itchb
Name
(RefSeq) itchy E3 ubiquitin protein ligase b
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
pswi04144
Endocytosis
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130199456 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130199456 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130199456 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130199456 (itchb)
04121 Ubiquitin system [BR:
pswi04121
]
130199456 (itchb)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130199456 (itchb)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130199456 (itchb)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
HECT type E3
130199456 (itchb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
130199456
NCBI-ProteinID:
XP_056278924
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All DBs
Position
9:6738923..6761398
Genome browser
AA seq
902 aa
AA seq
DB search
MASGVTKTGTSNGYPMKAQLQIIVLSAKLKGNRKNWFGPSPYVEVTVDGQSKKTEKCNNT
HCPKWKQPITVIVTPFSKLVFRVWSYQTLKSDVLLGMATLDVSDTLKSNDFKISEVVQIL
QLCADRDQSDVVGDLSVCLDGMTVDSEAFATAEADQHNASNGNSQTNGDQAVRQKSRDSS
PVVDGVEHRSSPSGRRSVSSSGSPSVSSRPLRPPRPSRPPPPTPRRPASSPASSSNGSAP
ADGSDNQSGSDTPVRTPASQPSAAPESSPSAGSDRNAAPAYSSEAAATGSVTPAVTPAVT
PAVTTAVTPAVPTAVTPVVPAVNAGPLPPGWEQRVDQNGRLYFVDHVEKRTSWERPEPLP
PGWERRVDQMGRVYFVDHMTRTTTWQRPTLETVRNYEQWQHQRSQLQGAMQQFNQRFIFG
QQDPLSATQDKEFDPLGPLPHGWEKRTDSTGRVYFVHHSTRATQWEDPRSQGLLNDKPLP
EGWEMRFTVDGIPYFVDHNRRATTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQ
LAMPQHIKITVTRKTLFEDSFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLS
HEVLNPMYCLFEYAGKDNYCLQINPASDINPDHLKYFKFIGRFIAMALFHSKFIDTGFSL
PFYKRILNKPLALKDLESIDPEFYNSLMWIKDNNIEECGLEMFFSVDNEILGELSTHELK
TGGGDLQVTEENKEEYIRLVAEWRMCRGVQEQTQAFFEGFNEVLPQQYLQYFDAKELEVM
LCGMQEIDLADWQRSTIYRHYARSSKQIIWFWQFIKEMDNEKRMRLLQFVTGTCRLPVGG
FADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQMKEKLMLAIEETEGFG
QE
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggagtcaccaagacgggcacttccaacggttacccgatgaaggcacagcta
caaatcatcgtgctgtcggcgaaactcaaagggaacaggaagaactggttcggtcccagt
ccctatgtggaagtgacggtcgacggacagtccaagaagacggagaaatgcaacaacacc
cactgccccaaatggaagcagccgatcactgtgattgtgactccgttcagcaaactggtg
tttcgcgtgtggagctaccagaccctgaagtccgacgtgttgctgggcatggccacgctg
gacgtcagtgacacgctcaaatccaacgactttaaaatctccgaggtggtgcagatcctc
cagctgtgtgcggaccgagaccagtcagatgtggtgggagacctgtccgtctgtctggac
ggcatgaccgtcgactctgaggcgttcgccacggccgaggctgaccaacacaatgcatca
aatgggaattcccaaaccaacggggatcaggccgtaaggcagaagagtcgagacagctcc
ccagtggtggatggcgtggagcacaggtcatctcccagtggccggaggtcagtgagcagc
tcggggtctccctcggtgtcatcaaggcctctccgacctcccaggccctccaggcctcca
cccccaaccccgcgcagacccgcctcttcgccagcgtcttccagcaacggctctgcacca
gccgacggcagcgataaccagtcgggctctgacacgccggtgcgaacaccggcttcacag
ccctcggcagccccagaatcgagtccatcggcaggttctgacaggaacgccgcgccggcc
tacagctctgaagccgcagcgaccggcagcgtcacccctgctgtcacccctgctgtcacc
cctgcagtcaccactgcagtcacccctgctgtccctaccgctgtcaccccagtggtccct
gctgtcaacgctgggccgttgccccctggatgggagcagagggtggatcagaacggccgg
ctgtatttcgtcgaccacgtggaaaagagaacatcgtgggagcgccctgaaccgctgccc
cctggctgggagcgccgtgtggaccagatggggcgggtctactttgtcgatcacatgacg
cgaaccaccacgtggcagcgccccacgctcgagacggtgcgtaactacgagcagtggcag
caccagcgcagccagctgcagggagccatgcagcagttcaaccagaggttcatattcggg
caacaagacccgttatcagccactcaagataaggagtttgatcccctcgggcctctgcca
catggatgggaaaagaggactgactcgactggtagagtttattttgtacatcactctacg
cgagcaacacagtgggaggacccacgatcacagggtttgctgaatgacaagccactcccg
gagggctgggagatgaggttcaccgtagacggtattccctactttgtagaccacaacagg
agagcgaccacctacatcgaccctcgaactggaaaatcctcacttgaaaacggacctcag
atcacctacgttcgagatttcaaagccaaagtacagtacttcagattctggtgccagcaa
ctggcgatgccgcaacacatcaagatcacagtaaccagaaaaaccctgtttgaggactcc
ttccagcagataatgagtttcaacgctcaggatctgcgaaggaggctatggatcatcttc
ccgggagaagaaggcctcgactacggaggcgttgccagggaatggttcttcctgctgtct
catgaggttttgaaccccatgtactgcctgttcgaatatgccgggaaagataactactgt
ctccagatcaaccctgcctccgacatcaaccctgaccatctcaagtatttcaagttcata
ggacgcttcattgccatggctcttttccacagcaagttcatcgacactggtttctcactg
ccattttacaagcgcatcctgaataagccgttagccctcaaagacctggagtcaatagac
ccggagttctacaactccctcatgtggatcaaggacaacaacatcgaggagtgcgggctg
gagatgttcttctctgttgacaatgaaatcctgggggaactctccacccatgagctgaaa
acaggaggcggagacctccaggtcaccgaggagaacaaagaggagtacatcaggctggta
gcagagtggcggatgtgcagaggagtgcaagagcagacgcaggctttctttgaaggcttc
aacgaggtcctccctcagcagtacctgcagtactttgatgctaaagagctcgaggtgatg
ctgtgtggtatgcaagagatcgaccttgcagactggcaaagaagcaccatctacagacac
tacgctcgaagcagcaaacagatcatctggttctggcagtttataaaggagatggacaat
gagaagaggatgaggctgctgcagtttgtcaccgggacctgtcgcctgcctgtcggaggc
tttgccgaccttatgggaagcaacggtccccagaagttctgtattgagaaggtgggaaaa
gaaaactggctacccaggagtcacacgtgcttcaacagactggacttgccgccctacaag
agctacgagcaaatgaaggagaagctgatgttggccatcgaggagacggaaggcttcgga
caggagtga
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