Pseudoliparis swirei (Mariana hadal snailfish): 130200419
Help
Entry
130200419 CDS
T09868
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04260
Cardiac muscle contraction
pswi04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130200419
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130200419
04261 Adrenergic signaling in cardiomyocytes
130200419
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130200419
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130200419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_2
dCache_1
MCP-like_PDC_1
DUF2201
Cache_3-Cache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
130200419
NCBI-ProteinID:
XP_056280665
LinkDB
All DBs
Position
10:complement(7052261..7127489)
Genome browser
AA seq
1080 aa
AA seq
DB search
MDYSVCLLLLLSTISSVSTGQFPTAQMIKEWVDQMQKELITLTDTASGMDNLIQIYHKHR
PHFSVETNDARHLVATAAGNIEKLLFKRSQALKRLAMEAEKFQMEHTWIGDSEVDKMVYY
NAKDDLNETEEVKGRKNRYLPDDFEIDPDFKRLVSYNTTAVHIPTDIYEGSNIILNELNW
TEALEDVFRKNKEEDPSLLWQVFGSATGLARYFPASPWTDSSNLADKIDLYDVRRRPWYI
QGAASPKDMLILVDASGSVSGLTLKLIRTSVSKMLETLSDDDYVNVVYFNDKATHAACFA
NLVQANVRNKRMLKDAVQNITAKGTTNYRGGFELAFEQLAQMNVTRANCNKIIMLFTDGG
EERAEDIFKKYNPKQAVRIFTFSVGQHNYDKGPIQWMACANKGYYYEIPSIGAIRINTQE
YLDVLGRPMVKADRRAKQVQWTNVYLDALELGLVITGTLPVFNKTNTGSKKTQNQLILGV
MAIDVSLEDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLLPSTAKFHESVTLDFLDAEL
ENSFKVEIRKKMIDGNTGNYTMSTLVKSQDERYIDVGQRTYTYAPVKGTDYSLALVLPDY
SMHYIKAKIADTITQAKFSESLMADKFDEYGYTFIAPRVYCKDLKPPDKNKNNTEFLIEF
NDYIDTKTPNNPMCNVELVNRLLLDAGITSSLIKHWKATDSQPGVLARFVATDGGITRVY
PKSAGLNWEGEAETYESSFYKRSMDNDLYIFTPTPYLSRENTSEESILVSKAVHLNIDGI
LLKPAVVGVKLDIGAWMASFINTTQKINCNDEICGCQRNDVYVDCVILDDGGFLVMSNRD
EHIDEIGRFFGAIDPILMVNLLNSSLFTFTKTFDYQSLCDPEKESKAAAGLRSVYVPTIA
DILNLGWFATAAAWSILQQLLVSITFPNFLDAAEMDEEMSDAMLKEVCITEQTQYYFETN
DPSFRGTIDCENCTRLYHAEKLPKTNLVFIIADAKLTCSSCDTKPLIQDEQQSNGPNPCE
LAQNPRYRKGPADCFDNNEHEKDPDCGGASGLSPSLWLMVALQLVLLWVSTGSRPHTIPS
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggattactcagtctgtttacttttactgctgtcaaccatttcatctgtgtcgaccgga
caattcccaacagcgcagatgataaaagaatgggtggatcagatgcaaaaagagttgatc
acattaacagacacagccagtggtatggacaacctaatacagatatatcataaacacaga
cctcacttcagcgttgagaccaacgatgcaaggcacctggtggcgacagctgctgggaat
atagagaaactgctattcaaacgctcccaagccctgaagaggctggcaatggaagcagaa
aagtttcagatggagcacacgtggatcggcgacagtgaggtcgacaaaatggtttactac
aatgccaaagatgaccttaatgagacagaggaagtcaaaggaaggaaaaaccgatatctt
cccgatgattttgagatcgaccccgacttcaagcggctcgtctcgtacaacaccaccgcc
gtccacatcccgacagacatatatgaaggctcaaacatcattttgaatgagctaaattgg
acagaggccttggaagatgttttccgaaaaaacaaagaggaagatccctcactcctctgg
caggtgtttggctcggccaccggattggctcggtacttcccagcatccccttggactgac
tcaagcaatttggccgataagatcgacctctatgatgttcgaaggcgaccgtggtacatt
cagggggcagcgtcacccaaggacatgctcatcctggtggacgcgagcggcagcgtttcg
gggctcaccctcaaactcatccgaacgtcggtcagcaagatgctggagacgctctccgac
gacgactacgtgaacgtggtctacttcaatgacaaggccacgcacgcggcgtgctttgcc
aacctggtgcaggccaacgtccgcaacaagaggatgctgaaagacgccgtgcagaacatc
acggccaagggtaccaccaactacagaggcggcttcgagctggcctttgagcagctcgcg
cagatgaatgtgacaagggccaattgtaacaagatcatcatgctcttcactgatggagga
gaagagagggcagaggatatctttaaaaaatacaaccccaagcaagcggtgcgcatcttt
acattttcagtaggccaacacaactatgacaaaggaccaatacagtggatggcctgcgct
aataaagggtactattatgagatcccatctattggtgccatcagaatcaacactcaggag
tacctggatgttttgggccggccgatggttaaggctgacagaagggccaagcaggttcag
tggaccaacgtctacctggatgcactggagctcggcctggtcatcactggcactctgccc
gtcttcaacaagaccaacacaggctcaaagaaaactcagaaccagctcatcttgggggtt
atggctattgatgtctccctggaagatatcaagagactgacgcctcggtttactttcgga
ccaaatggctactactttgccatcgaccccaatggatacgtgctgctccaccctaatctc
ctgccaagtactgccaagtttcatgaatctgtaacgctggacttcttggatgcagagctg
gagaattcgttcaaagtggagatcagaaaaaaaatgatcgacggtaatacagggaattac
accatgtctacattggtgaaatcccaagatgagcgctacattgacgtaggtcagaggacg
tacacctatgctccagtgaaggggacagattacagcctggctctggtccttcctgactac
agtatgcattacatcaaggccaaaatcgccgacacgatcacgcaggcaaaattttctgaa
agcctgatggcggacaagttcgatgaatacggctacacgtttatcgcaccgagggtttac
tgcaaggacttaaagccaccggacaagaacaaaaacaacactgagttcctcatcgagttc
aacgattacatcgacacaaagactccaaacaaccccatgtgtaacgtagagctggtgaac
cgattgctcctggatgctggcatcacctcgtctctgatcaagcattggaaggcaaccgac
tcacagcctggtgtcttggccagatttgttgccacggatggagggatcacgcgggtctac
cccaaaagtgccgggctgaactgggaaggagaagctgagacttacgagtcaagtttctat
aagagaagtatggacaatgatctgtacatcttcactccaacaccctacctctccagagag
aacacgagtgaggagtccatcctggtgagcaaagcagtacaccttaacattgatggaatc
ctactcaaacccgctgttgtcggtgtgaagctggacattggtgcctggatggcgagcttc
atcaacaccacacagaagatcaattgcaatgatgagatctgtggctgtcagcgtaatgat
gtgtatgtagactgtgtcatcctggacgatgggggcttcctggtgatgtcgaatagagac
gaacacatcgatgagattggacgtttctttggtgccatcgacccgatcctcatggtgaac
ctgctcaactcgtccctgttcacctttaccaagactttcgactaccagtcgctctgtgac
cctgagaaagagagcaaggcggctgcaggcctgcgatccgtctacgtgcccacaattgca
gatattttgaatttaggatggtttgcaaccgccgcagcctggtcaatactgcaacagtta
ctggtcagcatcacatttcccaatttcctagacgcagccgagatggatgaagaaatgtcg
gatgccatgctcaaagaagtctgcatcacagagcaaacgcaatattactttgagaccaac
gacccttctttcagaggaacaattgactgtgaaaactgcaccagactctaccatgctgaa
aagctgcccaagacgaacctggtcttcatcatcgctgatgcaaaactcacctgctcgtcc
tgtgacaccaagccgttaatacaggacgaacagcagtctaacggtcctaatccctgtgaa
ctggctcagaaccctcggtacaggaaagggcccgcggactgttttgataacaacgaacac
gagaaggaccctgactgtggcggggcgtccggcctgagcccctcactttggctgatggtg
gcccttcagctggttctgctctgggtttcgactggctccagaccccataccatcccatca
tga
DBGET
integrated database retrieval system
