Pseudoliparis swirei (Mariana hadal snailfish): 130201218
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Entry
130201218 CDS
T09868
Symbol
atxn3
Name
(RefSeq) ataxin-3 isoform X1
KO
K11863
ataxin-3 [EC:3.4.22.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130201218 (atxn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130201218 (atxn3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130201218 (atxn3)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C86
130201218 (atxn3)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
130201218 (atxn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Josephin
SUIM_assoc
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
130201218
NCBI-ProteinID:
XP_056281989
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Position
11:complement(2634336..2638504)
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AA seq
351 aa
AA seq
DB search
MDSIFHEKQEGSLCAQHCLNNLLQGEYFTPVDLSSIAHQLDEEERMRMAEGGMASEEYRT
FLQQPSGNMDDSGFFSIQVISNALRVWGLELILFNSREYQSLMINPINENAFICNYKEHW
FTIRKLGQQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVIRGNLPECDAQQILGI
MRVQQQQRPRLIGEDEAQTSAGMSAALTQTEMVFGVEDEVVDEDEELKKALAISRQDIDV
EDEEADLRRAIQLSMQGAVMSNKSSESEMGNVKPGSQAGGSSAGGHRAGHNEALTAEELR
KRRQAYFDRQQQQARPNIPQPDTKSSDGSGKYLLYYTVHIIYEFDQKSSPL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggattccatatttcatgagaaacaagagggctctctttgcgcccaacactgtctcaac
aacctcctgcagggtgagtatttcactcctgtggatctctcctccattgcgcatcagctt
gatgaagaggaaagaatgaggatggctgaagggggtatggccagcgaggagtataggacc
ttcttacagcaaccatctgggaacatggatgacagcgggttcttttcaattcaagtaatt
agcaatgccctgagagtgtggggtttggagttaatcctcttcaatagccgggagtaccag
agcctgatgattaatccaataaatgagaacgcttttatttgcaactacaaggagcactgg
tttacaatacggaaacttggacaacagtggtttaatctgaattcactgttgactggccca
gagttgatatcagacacctatctagcacttttccttgcacagttacaacaagaaggttat
tccatatttgtaatccgaggaaacctcccagagtgtgacgcacagcagattcttgggatc
atgagggtgcagcagcagcagcgaccaaggcttattggagaggatgaagcccagacaagt
gcaggtatgtcagcagctctgacccagacagagatggtctttggtgtggaggatgaggtc
gttgatgaagatgaagagctgaagaaagctctggcaatcagcagacaggacatagatgtg
gaagatgaagaagctgatcttcgtagggccatacagcttagcatgcaaggtgcagtgatg
agcaacaagtcctcagagtctgaaatgggaaatgtgaagccagggagccaggcagggggg
agttctgcaggaggacacagagctggccacaatgaggctctcacagccgaggaactgcgg
aagagaagacaagcctattttgatcggcagcagcaacaagctcggccgaacattcctcaa
ccagacacaaagtcatcagacggctcaggtaagtacttattatactacacagtgcacatt
atttatgaatttgatcaaaaatcctctcctctttaa
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