Pseudoliparis swirei (Mariana hadal snailfish): 130201454
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Entry
130201454 CDS
T09868
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04081
Hormone signaling
pswi04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
130201454 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130201454 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130201454 (rapgef4a)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
130201454 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
VTC
Motif
Other DBs
NCBI-GeneID:
130201454
NCBI-ProteinID:
XP_056282461
LinkDB
All DBs
Position
2:complement(9937839..9983945)
Genome browser
AA seq
1025 aa
AA seq
DB search
MVAAHTSSHSSESVEWIICLDKRPAERSGEDVDIILARLKNVKAFERFQPSLLQQICLCG
FYECLEKGITLYRQGDIGTSWYAVLSGSLDVKVSETSSYQDAVTICTLGSGTSFGESILD
NTPRHATIVTQEFSELLRIEQKEFKSLWEKYHQCMAGLLAPPYGVMESGCSGDRMPDKEN
ISNNSIVSVSKHQNKKSFIESPAKSHLKCISQVPSEKILRAGKILRNAILSRAPHMIRDR
KYHLKTYRQCCVGTELVDWQIQQSACIHSRIQAVGMWQVLLEEGVLNHVDQELSFQDKYH
FYRFLDDEQEDAPLLGEEERKESQEELQDTLLLLSQIGPDAHMRMILRKHPSERTADDLE
IIYEELLHIKALSHLSTTVRRELAGVLVFESHAKSGTVLFNQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDHCHFLTVDKEDFNRILRDVEANTV
RLKEHGQDVLVLEKSHSSCQTSSHGASSSHYKYKVMSGTPEKILEHLLEMMRLDSQFTES
DSALEDFVLTHCVFIPNSQLCPLLMAHYHAQALQGSEQEKLDYTLINKRRVIRLVMQWAA
VHGDHLQEEEVSGAFLEEFLMAVSHDAKEVPALRDQLTELERSIKPNTEDARVSQKKHKV
LLRQFSMGDEKLQKRQPIKSNDEILLKVYCCDHTYTTIRVSVAASVREVIGAVADKLGSA
EDLLLVNLSSAGEKVIFKPNDVSVFSTLSINGRLFACRRDQLDSLTPLPEQEGSSTGLLA
SFELMSSKDVAYHMTSYDWELFHCVHELELIYHTLGRQNFKKTTVNLDLFLRRFNEIQFW
VITEMCLCSQFSKRVQLLKKFLKIASHCKEYRNLNAFFAIIMGLSNPAVCRLSQTWEKLP
SKFKRFYGEFENLMDPSRNHRAYRLTVAKLEPPIIPFMPLLIKDITFTHEGNKTLIDYLV
NFEKMRMIANTLKIVRYCRSQPFSPGSPLASKNHPEVRTYVRQLKVIDNQRTLTQLSHGL
EPRRS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagcgcacacttcttcacattcgtcagaatctgtcgagtggataatttgtctg
gataagagaccagcagagcgctctggagaagacgttgacataatcctggcacggctgaaa
aacgtgaaggccttcgaaagattccagcccagtttgctgcagcagatttgcctgtgtgga
ttctatgagtgcttggagaaaggcatcaccttgtatcgccaaggagacattggcaccagc
tggtatgccgtgctttctggttcactggatgtcaaagtttcagagacatcaagttatcag
gatgctgttactatttgcacgctgggcagtggcacgtcatttggggagtcgattttggat
aacaccccccggcacgcaactattgtcacacaggaattcagtgagctcctccgcattgag
caaaaggagttcaagtctctgtgggagaaatatcatcagtgcatggctggactgctcgcc
ccaccatacggtgtgatggaaagtggttgtagcggtgacagaatgccggacaaagagaac
atcagtaacaactccattgtttctgtctccaaacatcagaataagaagtcattcattgaa
agtccagccaaatcccaccttaaatgcatttctcaggtcccttctgaaaagatactgcgg
gcggggaagattctccgtaacgccatcctctccagggcgcctcacatgatcagagacagg
aagtaccatttgaagacctacaggcagtgttgcgtggggacagagttggttgactggcaa
atacagcagagcgcatgcatccactctcgtattcaggctgtgggcatgtggcaggtgctg
ctggaagaaggtgttctcaaccacgtggaccaggagctgagcttccaggacaagtaccat
ttctaccgcttcctggatgacgagcaggaggatgctcctttactgggcgaggaggagagg
aaggagagccaagaggagctgcaggacaccttgctcctcctctcgcagattggacctgac
gcccacatgcggatgattctgaggaaacatccgtctgaaagaacagcagatgatttagag
atcatctatgaagagctgctccatataaaggccctgtctcacctgtccaccactgtaagg
agagaattggcaggagtgctggtctttgagtctcatgccaagtcaggaacagtgttgttc
aatcagggtgaggagggcacatcatggtacattattttgaagggctcagtcaatgttgtt
atctatggaaaaggtgttgtttgcactctacatgagggagacgacttcggaaagctcgct
cttgtcaatgacgccccccgcgctgcatcaatcgtccttagagaggatcactgccacttc
ctgacagttgacaaggaagacttcaataggattttgagggatgtggaggccaacacggtg
cgtctgaaggagcacggccaggatgttctggtgttagagaagagtcacagcagctgtcaa
acctccagccacggagcctcgtcctcccattacaaatacaaggtaatgtcggggaccccg
gagaagatattggagcacctcctcgaaatgatgcgattggattctcaattcacagagtca
gactcggccttagaggactttgtgctcacgcactgcgtcttcatcccaaacagtcaactg
tgtccgttgttgatggcccactaccatgcccaggctctgcagggctctgaacaggaaaag
ctggactacacactgattaacaagcgcagggtgatccgcctggtgatgcagtgggctgct
gtacatggagatcacctgcaggaggaggaagtctctggggccttcctagaggagtttctc
atggcagtatctcatgatgcaaaagaagttccggccctcagggaccaactcacagaacta
gagagaagtataaagccaaacactgaagacgccagagtctcacagaaaaagcacaaagtc
ctcctgcggcagtttagtatgggagatgagaagctccagaaacgccagcccatcaagagt
aatgatgaaattctgctcaaagtctactgctgcgaccacacctacacaacgattcgtgtc
tctgtggccgcctctgtcagggaggtcatcggtgctgtggccgacaagctggggtcagcg
gaggacctgctcctggtcaacctcagttcggcaggagagaaagtcatctttaagcccaat
gatgtttcagtgttctccactctcagcattaatggacggctgtttgcctgccggagggat
cagttggattctttgacccctttacccgagcaggagggttcctctacagggctgttggcc
agttttgagttgatgagctccaaagatgtggcataccacatgacttcctatgactgggag
ctttttcactgtgtacatgagcttgagctcatctaccacacattggggaggcaaaacttc
aagaaaaccaccgtgaacctggacctgttcctgaggaggtttaatgaaattcagttctgg
gtgatcacagagatgtgtctgtgttctcagttcagcaagagggtgcagcttctcaagaag
ttcctaaagattgcttctcactgcaaggagtacaggaacctgaacgccttctttgctatc
attatgggactaagcaacccagctgtgtgcagattgagtcagacctgggagaaacttccc
agcaaattcaagaggttttatggggaatttgaaaacttgatggacccgtccaggaaccac
cgggcgtaccgactgactgttgccaagctggaacctcccatcattcccttcatgccgctg
ctgatcaaagatataacattcactcatgagggcaacaagacgttgattgactatttggta
aattttgagaaaatgcggatgattgctaacacgttgaaaatagtgagatactgtcggagc
caaccattcagcccaggttcacctctggccagcaagaaccacccagaagttcggacttac
gtacgtcagctcaaggtgatcgacaatcaaaggacgctcactcagctttctcacggactt
gagccccgcaggtcttga
DBGET
integrated database retrieval system
