Pseudoliparis swirei (Mariana hadal snailfish): 130202256
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Entry
130202256 CDS
T09868
Symbol
ncoa1
Name
(RefSeq) nuclear receptor coactivator 1 isoform X1
KO
K09101
nuclear receptor coactivator 1 [EC:
2.3.1.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130202256 (ncoa1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
130202256 (ncoa1)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
130202256 (ncoa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NCOA
Nuc_rec_co-act
PAS
SRC-1
PAS_9
PAS_3
PAS_4
Motif
Other DBs
NCBI-GeneID:
130202256
NCBI-ProteinID:
XP_056283600
LinkDB
All DBs
Position
12:16799721..16848760
Genome browser
AA seq
1513 aa
AA seq
DB search
MSAVGENPLEPATPESRKRKGPPCDTSGQSVDKRRRELECRYIEELAELLSSNMGDIASL
SSKPDKCHILKTTVDQIQQMKRRDQEKALLSPDDEVQKSDISSSSQGLVEKEALGPMLLE
ALDGFFFVVNREGRIVFVSENVTSYLGYAQGELMTSSVYSMLHVGDHNEFVRNLLPKSLV
NGVQWPQEPSRRNSHTFNCRMLKRPPDELDSENPEARQQYEIMQCFTVSQPRPIMQEEGE
DLQSCLICIACRIPRAQPFSTESFITKQDPTGKIISIETSALRATGRPGWEDLVRKCIYA
FFQTQGKEPSHAKKLLHEVMTHGTAISPLYHFTLSDGTPLSAQTRCKFCCPPNPDVQPFI
MGIHTIDREHNTASSQENTNPSLPPTVGSLVQAPPRSPSLPPGSNWTQGSGLSTPGLQPN
NTNASPHGHNPATPTGYLTPSRTCLQQVGSPPPLNSPLTATPTSFMSPRVPRGSPGLGGS
PRVPGNPFSPSTAGLHPPAGELSSGGSLNRQQSGGDGSGGSMGSFSLSPPVLQRQTSTPT
APSTQSPSSKPPEGGEGGGEDSVKAPLPSVSQLGNPRLNQLLESNGRGVETNNNNNRIHC
TSAPHPPKPPPGPQCPASHSTLTERHKILHRLLQDTNDACTPTEEGGNKSDEIKRETPAS
SPALTAAPPKSTAKEPQDHQLLRFLLDTDEKDLGDLPPPSALSLQSVRVKMEKRTSMDRV
ACPGSTVAAGGASKPAGPCSSSASGSPKSSSVGEKRRVGRRDSRDSTMSGGAVDLDPLTQ
LLPGPRGPSGAKQGSEDSTTLGGGPQLHSPASQPPAQLQSPQLQRQSPLPQRQSPLPQLQ
SPLPQIQSPLPQIQSPLSQSLPHLQSPSPRLHSPSPQLQLQSPTQLQPCEASTPRNVNVK
RGASGTPNRGLGDGGPPSGCNLQSPSSFDFSSSPTPSHTQQQRQEDPFQTPMDSSIFPEA
EVINPFSSSVGLSKMDVGESLFLSLSDTFTFDGLGTPLQAPLASPQEQCVPCTLDEVLGP
PTMPEGRNDENALLEQLVSFLSGTDESELAELDKALGIDKLVQGGCFQQQPQDFPTQQST
AAPGSMDPKLHAYPSQFTAAAVQAQFPPELATLVGQQDLGFGAPRGAFPGGTTGVGLRPG
MPRPQGVGTQLRLPPNQLRLQLQQRVQGPQQLQNRMASINPFPGGVQHVNMGLRQGGQQP
QMPSQPPLNAQMLAQRQRELYSIQHRQRQLFQQKVMLMRHNIAGAPTGDAGAGEMARAPK
GPPPTPQQQQQFNFPAGYNPLTGTSPTSPGHFSPMDNKLTSQTLMGGVQGQFSSTVNATM
PQGLFQQSGGSAVSQQDASFPPEMGPTSPLLSPQNSTSQSPLLQQAPPPGYQSPEMKSWQ
QTGVGSNSLFSQSGQSAAQPFGSQGVYNNMSITVSMAGGSGAVGSLSPMGQPVGMGNSNL
GNVSSVCTDQQVQQVQVFADVQCTVNLVGEDSYLNQGSVGAASPQKDPGGGVPQGSQNNQ
AQQKSLLQQLLTE
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgtaggggagaaccccctggagcccgccacgccagagtcacgcaagaggaag
ggccccccatgtgacacctcaggccaaagcgtggacaagcggagacgggagctggagtgt
cgatacatcgaggagctggctgagctgctgtcatccaacatgggcgacattgccagtctc
agttccaagcccgacaagtgccacatcctcaagacgactgtggaccaaatccagcagatg
aaacggcgtgaccaggagaaagctcttctgtctccagatgatgaggtgcagaagagcgac
atctcctccagcagccaggggctggtggagaaagaggcgctggggcccatgctgcttgag
gccctcgacgggttcttcttcgtcgtcaaccgggagggccgcatcgtctttgtttcggag
aacgtgacgagttacctcggatacgcccagggcgagctgatgacctcgagcgtgtacagc
atgctgcatgtgggagaccacaatgaatttgttcgcaatctgctgcccaaaagcctggtt
aacggcgtgcagtggccgcaggagccgagccggaggaacagccacacctttaactgtcgc
atgctgaagaggccaccggacgagttggattccgaaaacccggaggcccggcagcagtat
gagatcatgcagtgtttcaccgtgtcccaaccacggcccatcatgcaggaggagggagag
gacctgcagagctgcctgatctgtattgcctgtcggataccacgcgcccagcctttcagc
actgagtcgttcatcaccaagcaggaccccacagggaagatcatctccatagaaaccagt
gctttgcgagcgacgggccggcctggctgggaggacctggtcaggaagtgcatctacgct
ttctttcagacgcagggcaaagagccctcccacgccaagaagctgctgcatgaggtgatg
acccacggcaccgccatcagcccgctgtaccatttcacgttaagcgacggcaccccgctc
agcgctcagacccgctgcaagttctgctgcccccccaaccctgacgttcagcccttcatt
atgggcattcacactattgacagggaacacaacactgctagctctcaggaaaacactaac
cccagccttccaccgaccgttggcagccttgtccaagctccgccccgctccccttccctt
cctcccggcagcaactggacccaaggctcaggcctctccaccccgggccttcagcccaac
aacaccaacgcctccccacacggacataatccagccacacccacaggctacctgacaccc
agtcggacctgtctccagcaggtcggcagccctccccctttgaacagcccactcacagca
acccctacctcttttatgtcacccagggtgccacgaggcagccctgggttaggtggaagc
cctcgggtaccggggaaccccttctctccttccacagcaggcctccaccccccagccggg
gaactaagtagtggaggcagcctcaacaggcagcagtctggcggggatggtagcggcggg
tcaatggggtccttctctctgtcccctccggtccttcagagacaaaccagtacgcccacc
gcgccctctactcagtctccatcatcaaagccgccagagggaggagaaggagggggagag
gactctgttaaagcccctcttccttctgtttcacagctgggtaaccccagactcaatcag
ctcctggaaagcaatggtagaggagttgaaactaacaacaacaacaacagaatccactgc
acctcagcacctcatcctcctaaacctccccctggccctcagtgccctgcctctcacagt
acgctaacagagcggcataagatcctgcaccggctgctccaggacaccaacgatgcgtgc
acccccactgaggagggaggaaacaaaagcgatgagatcaagagggagacgccagccagt
agtccggctctgaccgcagctccgcccaagtccaccgccaaagagccacaggaccatcaa
ctactccgttttctcctggacacagacgaaaaggacttgggagacctgccaccgccatct
gctctcagcctgcagtctgtgagggtaaaaatggagaagagaaccagcatggacagagtg
gcctgtcccgggtccactgtagcagcgggaggggcatccaaaccggcgggaccgtgcagc
agctcggcgagcggcagccccaaatcgagctccgtcggagagaagcgccgcgtcggccgc
agggacagccgagactccacgatgtctggtggcgctgttgacttggaccctctcacccag
ctgctgcctggcccgagaggcccaagtggggctaaacagggcagtgaggattcaacaacc
cttggaggaggcccccaactccactctccagcctctcagcccccagctcagctccagtcc
ccccagcttcaacgccagtcccctctgcctcagcgccagtcccccttgccccagcttcag
tcccccctgcctcagatccagtcccctctgcctcagatccagtcccccctgtcccagtcc
cttccccatttgcagtcgccgtcaccccgtctccactccccttctccccagctccaactg
cagtcccccactcagctccagccctgtgaggccagcactccccgcaatgtaaatgtgaag
agaggggcttccggcactcctaacagaggactcggtgatggtggcccaccctccggctgc
aacctccagagtccgtcctcctttgatttctccagttcccccactccaagccacacacag
cagcagagacaggaagaccccttccagacccccatggacagcagcatcttcccagaggct
gaagtcatcaaccctttcagttcaagcgtcggcctatccaagatggatgtgggagagtct
ctgttcctgtctctgtccgacaccttcaccttcgatggcctcggaacacctttacaagct
cccctggcatcgccgcaagagcagtgtgtgccctgtacgctggatgaagtgctcggcccc
ccgaccatgcccgagggccgcaacgatgagaatgctctgctggagcagctcgtctccttc
ctcagcgggaccgacgagagcgagctggccgagctggacaaggccctgggcatcgacaag
ctggtgcagggtggttgttttcagcaacagccccaagacttcccaacccagcaatccact
gccgcccccggttccatggaccctaaactccacgcgtacccgtcccaatttacagccgcc
gccgtgcaagcccagtttcctcccgagctggccacgttggtggggcaacaggatctcggg
tttggagccccgcggggggctttccccggcgggacgacgggcgtcgggctgaggccgggc
atgccgagaccgcagggggtcggcacgcagctccgactgccacccaaccaactgcgcctg
cagctgcagcagagggtccagggcccacagcagctccagaacaggatggcgagcatcaat
ccgtttccaggaggagtccagcatgtgaacatggggctccgtcaggggggtcaacaacct
caaatgccctcgcagccgccgctgaacgcccagatgctggcccagcggcagagggagctc
tacagcatccagcaccgccagcgccagctcttccagcagaaggtcatgctgatgagacac
aacattgcaggcgcgccgaccggagacgcgggggccggcgaaatggccagggccccgaag
ggtccgccgccaacgcctcaacaacagcaacagttcaacttcccagcagggtacaaccct
ttgacgggaacatcccctacctcacccggccacttcagccccatggacaacaaactgacc
agccagacgctgatgggcggcgtgcagggtcagttcagcagcaccgtgaacgccacaatg
ccgcagggcctgtttcagcagtctggagggtctgccgtctcccagcaagacgcatctttc
cctccggagatgggccccaccagcccattgttgtctcctcaaaactccacctcccagagt
cctttgcttcagcaagccccaccccctggctaccagtcaccagaaatgaagagctggcaa
cagacgggcgtgggaagcaacagcctgttcagtcagtcaggacagagtgcggcgcagcct
tttggctcgcagggcgtgtacaacaacatgagcatcaccgtctccatggccgggggctcg
ggtgccgtcggctcgttgtcgcccatggggcagccggttggcatgggcaacagtaacctc
ggcaacgtcagttcagtgtgcaccgaccagcaggtgcagcaggtccaggtattcgcggac
gtccagtgcacggtgaacctggtgggcgaggactcgtacctgaaccagggctccgtcgga
gcggcgtccccccagaaggaccccggcggcggcgtgccgcagggctcccagaacaaccag
gcccagcagaagagcctcctccagcagctgctcaccgagtga
DBGET
integrated database retrieval system
