Pseudoliparis swirei (Mariana hadal snailfish): 130202392
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Entry
130202392 CDS
T09868
Symbol
tshr
Name
(RefSeq) thyrotropin receptor
KO
K04249
thyrotropin receptor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130202392 (tshr)
04081 Hormone signaling
130202392 (tshr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pswi04030
]
130202392 (tshr)
G protein-coupled receptors [BR:
pswi04030
]
Rhodopsin family
Peptide
Thyrotropin
130202392 (tshr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
Comm
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
130202392
NCBI-ProteinID:
XP_056283872
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All DBs
Position
12:complement(22991913..23013390)
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AA seq
794 aa
AA seq
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MQVITCALFTLASLPISAGLEAASCGPGAASCGPEAASCGSEAASCPAVCECSEWKTLTI
SCFDIAALPRFPASTETLWLFETRLSSVPTDAFASMVNISRIYISVDVVLQRLERHAFHS
LQSITHIELRNAKSLRSIDPEAFQNLPNLKYLGLFNTGLSLFPDLSNIHSNDLNFILELV
DHPFITEVPANAFRGVTSNTLTVMMYGNGFREIQHHAFNGTRLDQVDLHRNRYLTTMDDQ
AFAGAVSGPMLLDVSLTAITSLPTTGVASLRELKARDAWALKKLPPIKTFKHLTIANLTY
PSHCCGFKNLKKKRGFLEYLICNLTAFYDQQHKRSVGPLGIPSLQGDVVEESVPDEDPDD
GSHKESRDWRRGDLHGSLHYHTYFGGQPDEDVGFGETLKNPQEDTSQDFNSRYDYVVCEE
GEEVACAPVPDEFNPCEDIMGFGFLRVSVWFVSLLAVLGNVVVLLVLLTSHYKLSVSRFL
MCHLAFADLCMGIYLLLIASVDLHTRAEYFNHAIDWQTGPGCGLAGFFTVFASELSVYTL
TVITLERWYAITFAMRLDRKLRLQHAAAVMLGGWIFCLLLALLPLVGVSSYQKVSICLPM
DTQSAVAQVFILSVLVLNILAFLVICACYFKIYCTVHNPHYRSGSKDTNIAKRMAVLIFT
DFLCMAPISFYAMSAAMDRPLITVSNSKILLVLFYPLNSCANPFLYAIFTKAFRGDIFIL
LSKVGLCRQRAQLFRGQTVSSKGSSAASQNRKDKDRVQKGQEQVPICLKKCSGGTDHQAA
CRPTGPEESRSLNT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgatcacgtgcgcgctattcacgctggccagcctccccatcagcgccgggctt
gaagccgcgtcctgcgggccgggggccgcgtcctgcgggccggaggccgcgtcctgcggg
tcggaggccgcgtcctgccccgccgtctgcgagtgctccgagtggaagacgctcaccatc
tcgtgcttcgacatcgcggctctgccccggttccccgccagcacggagacgctatggctt
ttcgagacgcggctgtcgtcggtgccgacggacgccttcgccagcatggtcaacatctcc
aggatatacatctccgtggacgtggtgctgcagaggctggagaggcacgccttccacagc
ctgcagagcatcacccacatagagttgcgcaacgcaaagagtctgcgctccatcgaccca
gaagccttccagaacctcccaaacctcaagtacttggggctcttcaacaccggtctctct
ctcttccccgacctgagcaacattcactccaacgacctgaacttcatcctggagctggtg
gatcatcccttcatcacggaggtcccagccaacgccttcaggggcgtgaccagcaacacg
ctgacggtgatgatgtatgggaacggcttcagggagatccagcaccacgccttcaacggg
acccggctggatcaggtagaccttcacaggaacaggtacctgaccacgatggatgaccag
gcgtttgcgggcgccgtcagcggccccatgctgctagacgtgtccctcacagcgatcacc
tccctgccgaccacaggtgttgcttctctccgggagctgaaggctcgcgatgcctgggcc
ctcaagaagctaccacccatcaagaccttcaagcacctcaccatcgccaacctcacctac
cccagccactgctgcggcttcaagaacctcaagaaaaaacgaggcttcctggagtacctc
atctgtaacctgactgcgttctacgaccagcagcacaagcgttcggtcgggccccttggc
atcccgtccctccagggggacgtcgtggaggagtcggtcccagacgaggatccagatgac
ggaagccacaaagagtcccgagactggaggagaggtgacttacatggaagcctccactac
cacacctattttgggggccagccagatgaggatgtgggttttggagagaccctcaagaac
ccccaggaggacaccagccaagactttaacagtcggtacgattatgtggtgtgtgaggag
ggggaggaggtggcatgtgcaccagtgcctgatgagttcaatccttgtgaggacataatg
gggtttggcttcttgcgagtgtccgtgtggtttgtgagtctgctggcggttctgggtaac
gtggtggtgctcctggtgctgctcaccagccactacaagctctcggtctcccgcttcctc
atgtgtcacctggcctttgcagatctgtgcatggggatctatctgctgctcatcgcctcc
gtagacctccacacccgagccgagtacttcaaccacgccatcgactggcagacgggcccc
ggctgtggactcgcggggttctttacggtcttcgcaagcgagctgtcggtctacacctta
acggtgatcactctggagaggtggtacgccatcacctttgctatgcggctggatcgtaag
ctgcgtctgcagcacgcggcggccgtgatgctcggcggctggatcttctgcctcctgctg
gcgctgctgccgctggtcggggtgagcagttaccagaaggtcagcatctgtctcccgatg
gacacccagtccgccgtggcgcaggtcttcatcttgtcagtgctggtgctcaacatccta
gcctttctggttatctgcgcttgctacttcaagatctactgcacagtgcacaaccctcac
taccgctctggatccaaggataccaacatcgccaagcgcatggccgtcctcatcttcacg
gacttcttgtgcatggcgcccatctccttctacgccatgtcggccgcaatggaccggccg
ctcatcaccgtctccaactccaagattttattggtgctcttctacccgctcaactcctgc
gccaacccgttcctctatgccatcttcaccaaggctttccggggggacatattcatcctc
ctcagtaaggtgggcctctgtcggcagcgagcgcagctgttcagaggccagacggtgtcg
tcgaagggcagcagcgccgcatctcagaaccgtaaagacaaggaccgggttcagaaaggc
caggaacaagtgcccatctgcctgaagaagtgctccggggggaccgaccaccaagccgcc
tgccggccgacggggcctgaagagagccggagcctgaacacgtga
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