Pseudoliparis swirei (Mariana hadal snailfish): 130202511
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Entry
130202511 CDS
T09868
Symbol
runx2b
Name
(RefSeq) runt-related transcription factor 2b isoform X1
KO
K09278
runt-related transcription factor 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130202511 (runx2b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
130202511 (runx2b)
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GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
130202511
NCBI-ProteinID:
XP_056284089
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Position
12:complement(3468981..3494703)
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AA seq
452 aa
AA seq
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MRIPVDPSASRRFSPPANGLQTVPGKMNDVSSPATQPDAAAVPRLRPHENRSMAEIIADH
PAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDIPDGTVVTVMAGNDENYSAELR
NASGVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRR
HRQKLEDPPKTGLFSDRLSELERMRVRVAMPAQGGPRPALNAGANTFNPQGQTQISDPRQ
SQSSPPWSYEQTYPSYLSPMASPSLHSTAPLSSSRGTGLPAISDVPRRLTGSSDLSPFPG
QFERQFPGLPPLAETRFSGPRMHYPGTFAYTAPPVTSAMSLGSAHYHTYLPPPYPGSAQS
QTGPFQTGSAPYLYYGASSGSYQFSMVPGGDRSPSRMIPPCTSASTGTSLVNPNLPSQTE
GGGVDGGDGSHSNSPTVLNSGGRMDEAVWRPY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcccgtagatcccagcgccagccggaggttcagcccgccggccaacggcctc
cagacggtcccgggcaagatgaacgacgtgagctccccggcgacacagccggacgccgcc
gcggtgccgaggctcagaccccacgagaaccgcagcatggccgagatcatcgcggaccac
ccggccgagctggtccggaccgacagccccaacttcctgtgctcggtgctgccctcccac
tggcggtgcaacaagacgctgccggtcgccttcaaggtggtcgccctgggagacataccc
gacggcaccgttgtcacggtgatggcgggcaacgacgagaactactccgccgagctgcgc
aacgcctccggcgtgatgaagaaccaggtggcgcgcttcaacgacctccgcttcgtgggc
cgcagcggccgaggcaagagcttcacgctgacaatcaccgtcttcaccaacccgccgcaa
gtggccacttaccaccgagccataaaggtcaccgtggacggaccgcgggagcccaggaga
catcgtcagaaactcgaggacccgcccaaaacgggtctcttctcagaccgccttagcgag
ctcgagaggatgagggtgagggtggccatgcccgctcagggggggccccggcccgccctc
aacgcgggggccaacaccttcaacccccagggacagacgcagatctcagacccccggcag
tcgcagtcctctcctccgtggtcctacgagcagacctacccgtcctacctgagtcccatg
gcgtccccctcgctccactccaccgcccccctctcctccagccggggcacggggctgccg
gccatcagcgacgtgccgaggcgactgacaggttcctccgacctgagcccgttcccgggt
cagtttgagcgccagttcccgggcctccccccgctggcggagacgcgcttctccggcccc
cggatgcactacccgggcaccttcgcctacaccgcgccgcccgtgacctccgccatgtcg
ctgggcagcgcccactaccacacctacctgccgccgccgtacccgggctccgcccagagc
cagacgggccccttccagacgggcagcgcgccgtacctgtactacggcgcgtcgtccggg
tcctaccagttctccatggtgccgggcggcgaccgctcgccgtcccgcatgatcccgccc
tgcacgagcgcgtccacggggaccagcctggtgaaccccaacctgcccagccagacggag
ggcgggggggtggacggcggcgacggcagccacagcaactcccccacggtgctgaactcc
ggcggccgcatggatgaagccgtctggcggccgtattga
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