Pseudoliparis swirei (Mariana hadal snailfish): 130203154
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Entry
130203154 CDS
T09868
Symbol
dock1
Name
(RefSeq) dedicator of cytokinesis protein 1
KO
K13708
dedicator of cytokinesis protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04148
Efferocytosis
pswi04510
Focal adhesion
pswi04810
Regulation of actin cytoskeleton
pswi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130203154 (dock1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130203154 (dock1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130203154 (dock1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130203154 (dock1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203154 (dock1)
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130203154 (dock1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_DOCK
DOCK_N
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_A
DHR-2_Lobe_B
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
130203154
NCBI-ProteinID:
XP_056285036
LinkDB
All DBs
Position
13:6711930..6876440
Genome browser
AA seq
1870 aa
AA seq
DB search
MSRWVPTKREKYGVAIYNYDARGEEELSLQIGDTVHILETHEDWYRGHRLRRRSKKGIFP
ACYVHLKEATVEGNGHKETVIPTELPLVQEVTTTLREWATIWRDLYVGDRREMFNSVRDM
IYSLIEWRSQILSGTLPQDELSELKQKVTSKIDYGNKYLDLDLVVRDQDGNILDPELTST
VSLFRAHEAASKQIEDRIQEERSQKQNIDLSRQAKFASTPAFALFVTLKNVVCKIGEDAE
VLMSLYDPVDSKFISENYLVKWSSSGLVKDIDQLHNLRAVFTDLGSEDLKREKISFVCQI
VRVGRMELRDNNTKKLTSGLRRPFGVAVMDVTDIIMGKTDDEDKQHFIPFQPVAGENDFL
QTVINKVITAKEVNHKGQGLWVTLKLLPGDIHQIRKDFPHLVDRSTAVARKMGFPEIIMP
GDVRNDIYVTLALGDFDKGSKTKPKNVEVIMSVYDEDGKKLENVIFPGAGDEGINEYKTV
IYYQVKQSRWFETIKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKTFALAFVKLMRYDG
TTLRDGEHDLIVYKAEAKKLEDSSLYLCLPATKLELEEKGYSTTGKNSQNLGNCSISKDS
FQISTLVCSTKLTQNVDLLGLLKWRSNTSLLQQNLRQLMKVEGGEVVKFLQDTLDALFNI
MMENSDSDTFDTLVFDALVFIIGLIADRKFQHFNPVLETYIRKHFSATLAYTKLTKVLKN
YVESAEKLTEQLLKAMKALEYIFKFIVRSRVLFNQLYENKGEADFMESLRNLFTSFNDMM
NSNSENTGMVKGAALKYIPTIVNDVKLVFDPKELSKLFTEFILKVPLGRLVKQKLDCLID
IVHSDLFTHHDCREILLPLMTDQLKFHLEKREEPKACCQLLSDILEVLYRRDVGPTQWHV
QIVMEKLLRTVNRTVISMGRESPHIGSFVASMTATLRQMDDYHYAHLISTFGKIRSDVVD
FLMETFIMFKDLIGKNVYPSDWVIMNIMQNKVFLRAINQYAAVLNKKFLDQTNFELQLWN
NYFHLAVAFLTQESLQLENFSSDKRAKIFQKYQDMRRQIGFEIRDMWYNLGPHKIKFIPE
MVGPMLEMTLVPEIELRKATIPIFFDMMQCEFHFTCTFQRFENEIITKLDHEVEGGCGDE
QYKVLFQKILLEHCRKHKYLAKTGENFVTLVVRLLERLLDYRTIMHDENKENRMSCTVNV
LNFYKEIDREEMYIRYLYKLCDLHKECDNYTEAAYTLLLHAKLLKWSDEQCAAHLNQRDG
YQATTQGQLKDQLYQQIINYFDKGKMWEEAIILGKELAEQYENEMFDFEQLSASLRKQAQ
FYENIVKVIRPKPDYFAVGYYGMGFPSFLRHKMFIYRGKDYERREDIEARLLTQFPNAEK
MKTTTPPSEDTKCSSGQYFQCFTVKPILDLPAKFHNKPVSEQIVSFYTVNEVHKFQYSRP
ARKGENDPDNEFANMWIERTTYTTAYKLPGILRWFEVKSVSMEEISPLEIAMETMQLTNE
KISSMVQRHLNDPNLPISPLSMLLNGIVDPAVMGGFTNYEKAFFNDKYIQEHPEDLEKIE
KLKDFIAWQIPHLSEGVRIHGEKVTEALRPFHDRLEACFKQLREKVEKQYGVKTLPAADE
RRGSRPHSMVRSFTMPSSQRPLSVASVTSISSDNSPSRPGSDGFALEPLLPKKLHNKSQD
KLDRDESERERKEKKKEKRNSKHQEIFDKEMKTTEIPLQHAEAVILSETISPLRPQRPRS
QVLNQIGGDRRLSVSPGPPSSSSSNSSSSLGPPPITPRSKLSFSLHAVSSLELNGMGCSD
KGDTPPPLPVKGSNADYGNLLDNQDLTSPSTPPPPPHQRDLPPPLPSKTPPPPPPKTTRK
QASIDSGIVQ
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctgggtgcccacgaagagggaaaagtacggcgtcgcaatctataactatgat
gcccgaggagaggaggagctgtcgctgcagatcggagacacagtgcacatacttgagacg
cacgaagactggtacagagggcatcggctgaggagaagatccaaaaagggcatatttcct
gcttgttacgtccacctgaaagaggccacggtcgagggcaatgggcacaaggagacggtc
attcccactgagctgcccctggtccaggaggtcaccaccacactgcgggagtgggcgaca
atatggagggatttgtatgtgggcgacagacgggagatgttcaactcggtccgtgacatg
atctacagcctcatcgaatggcgttcccagatcctgtccggcaccctaccgcaggacgag
ctctccgagctcaagcagaaagtcacctccaagatcgactacggcaacaagtacttggat
ctggatctggtggtcagagaccaagatggaaacatactggacccagagctcaccagcacc
gtcagcctgttcagagctcacgaggcggcctccaaacaaatcgaggaccggattcaagaa
gagaggtctcagaagcagaatattgatctaagcaggcaagcaaagtttgcctccacgcca
gcctttgccctcttcgtgactctgaagaatgtggtgtgtaagatcggggaggacgcagag
gtcctcatgtctctctacgacccagtggactccaagttcatcagtgaaaactacctggtg
aaatggtcaagttcaggtctggtgaaagacatagaccagcttcataacctgcgggctgtc
ttcacggacttgggcagcgaggatctgaagagagagaagatcagctttgtgtgtcagatt
gtcagagtggggcgcatggagctgagagacaacaacaccaagaagctgacgtcgggtctg
aggaggccctttggagttgcagtaatggatgtcactgacatcataatgggcaaaacggac
gatgaagacaagcagcactttatcccgtttcagccggtggccggggagaacgacttcctc
cagacagtcatcaacaaagttatcaccgccaaggaagtcaaccacaagggccaaggcctg
tgggtgactctgaagctgcttcccggagacatccaccagatacggaaggacttccctcac
ctggtggaccgatcgacagctgtggctcgcaagatgggctttcctgagatcatcatgcca
ggcgatgtgcgaaacgacatctacgtgactctggcgctcggggatttcgacaaggggagc
aagaccaagcccaaaaatgttgaggtgatcatgtccgtttacgacgaggacggcaagaaa
ctggagaatgtgatcttccccggagctggagatgaggggatcaatgagtacaagacggtc
atctactaccaagtgaagcagtcccgctggtttgaaaccataaaggttgctatcccgatc
gaggacgtgaaccggagccacttgcggtttacctttcgccaccgctcatcgcaagactcc
aaagacaagtcggagaagacattcgctctggcttttgtgaagttgatgaggtacgacggg
acgaccctgagggacggcgagcacgatctcatcgtgtacaaggcagaagcaaagaagttg
gaggactcttctctgtacttgtgcctgcccgccaccaagctggagctggaggagaagggc
tactccaccacgggcaagaactcccagaacctgggcaactgctccatcagcaaggactcc
ttccagatctccaccctggtctgctccaccaagctcacgcagaacgtggacttgctgggc
ctgctgaagtggcgctccaacaccagcctgctgcagcagaacctccgtcagctgatgaag
gtggaaggcggcgaggtcgtcaagttcctgcaagacactctggatgccctcttcaacatc
atgatggagaactctgacagtgacacttttgatactctggtgttcgatgccttggtgttc
ataattgggctcatagccgacaggaagttccaacacttcaaccctgtcctggagacgtac
atccggaagcatttcagtgccacgctggcatacacgaagttgaccaaagtcctgaagaac
tacgtggaaagtgctgagaagctgacggagcagctcctgaaggccatgaaggcgctggag
tacatcttcaagtttatcgtccgctccagagtcctcttcaatcagctctacgagaacaaa
ggagaggccgacttcatggagtccttgaggaacctgttcacatccttcaatgacatgatg
aacagtaattcagagaacactggcatggtgaagggtgctgccctgaagtacattcccacc
atcgtcaacgacgtcaagctggtctttgatccaaaggaactcagcaagctgttcaccgaa
ttcatcctcaaggttcctcttgggcgcctggtgaaacagaagctcgactgtctgattgac
atcgtccacagcgatctctttactcatcacgattgccgagagattctcctgccgctgatg
acggaccagctgaagttccacctggagaagcgcgaggagcccaaggcttgctgccagctg
ctcagcgacatcctggaggtgctctacaggagggatgtgggtcccacccagtggcacgtg
cagatcgtcatggagaagctgctgaggacggtcaacaggacggtcatttcgatgggccgc
gagtcccctcacattgggagcttcgtggccagcatgactgccacactgaggcagatggac
gactatcattacgctcatctgatcagcacctttggcaagataaggagcgatgtggtggat
ttcctaatggaaacatttatcatgtttaaagatctcatcgggaaaaacgtctacccctca
gactgggtcataatgaacatcatgcaaaacaaagtgttcctgcgggccattaatcagtat
gcagccgtgttgaacaagaaatttctggatcaaaccaactttgagctacagctgtggaac
aactactttcacctggcggtggccttcctcacccaggagtcactgcagctggaaaacttc
tcgagtgacaaaagagccaagatcttccagaagtaccaggacatgagaagacaaattggc
tttgaaatcagggacatgtggtacaatctagggccccacaagataaaattcattccagag
atggtgggtcctatgctggagatgacactggttcccgagattgagttgcggaaggccacc
atccccatcttctttgacatgatgcagtgcgagttccacttcacgtgcaccttccagcgg
ttcgagaatgagatcatcaccaagctggatcacgaggtggaggggggctgcggagacgag
cagtacaaagttctctttcagaaaattttgctggagcactgcaggaagcacaagtacttg
gccaagacgggcgagaacttcgtcactctggtggttcgtctgctggagaggttgctggac
tacaggaccatcatgcacgacgagaacaaagagaaccgcatgagctgcactgtaaacgtg
ctcaacttttacaaggagatagacagagaagagatgtacatcaggtacctgtacaagctg
tgtgacctccacaaagagtgcgacaactacaccgaggcggcctacactctgctgctgcac
gccaagctgctgaagtggtcagacgagcaatgtgcagcccacctgaaccagagagacggc
taccaagccaccactcaaggacagcttaaggaccagctctaccagcagattatcaattac
tttgacaagggcaagatgtgggaggaggccatcattttgggaaaggagctggctgaacag
tacgagaatgaaatgtttgactttgagcagctcagtgcatccttgcggaagcaagcccag
ttctatgagaacatagtgaaggtcatccggcccaaacctgactactttgccgtcggctac
tacggcatgggcttcccctccttcctccgccacaaaatgttcatctaccgagggaaggac
tacgagcgcagagaggacatcgaggcgcgtctcctcacacagtttcccaacgcagagaag
atgaagacgaccacgccgcccagcgaggacacaaagtgttcttctggacaatacttccag
tgtttcactgttaaacccatcctcgacctgcccgccaagttccacaacaagcccgtctct
gaacaaatagtgagtttctacacagtaaatgaagtccataaattccagtattccaggcca
gcgaggaagggggagaacgaccccgacaacgagtttgcgaatatgtggattgagaggacc
acgtacacgacggcatacaaacttcctggcatcctgcgctggtttgaagtcaagtcggtc
tccatggaggagatcagtcctttggagatcgccatggaaacgatgcagctgaccaatgag
aagatcagcagcatggtgcagaggcatctcaacgatcccaaccttcccatcagccccctc
tccatgctgctgaatgggattgtggacccggctgttatgggaggtttcaccaactatgag
aaggccttcttcaatgataagtacatccaggaacacccagaggacctggagaagatcgag
aaactaaaggacttcatcgcctggcagatcccacacctctccgaaggtgttcgcatccac
ggagagaaggtcacggaggcgctgaggcctttccacgaccgcttggaggcctgcttcaag
caactgcgggagaaggtggagaagcagtacggggtcaaaacgctgcccgcagcagacgag
cggaggggctctcgtcctcactccatggtgcgctccttcaccatgccctcctcccagagg
ccgctgtcggtggcttccgtcacctccatctcctctgacaactccccctccaggcccggc
tcagatggttttgccctggagcctctcctgccaaagaagctgcacaacaagtctcaggac
aagctggaccgcgacgagtccgagagggagcgcaaagagaaaaagaaggagaagaggaac
agtaagcaccaggagatctttgacaaagagatgaagaccaccgagatccctctgcagcac
gccgaagccgtcatcctgtcagagacgatcagtcctctgcggcctcagagaccgaggagt
caagttctcaaccagatcgggggagaccgtcgcctctccgtgtcccccggacccccttct
tcctcttcctcaaactcctcctcctcgctgggaccaccgcccatcacacccaggagcaaa
ctctccttcagcctgcacgctgtttccagtctggagctgaacggcatgggctgctcggac
aaaggggacacccctcccccgctgccggtgaaaggcagcaacgctgattacggcaacctg
ctagataatcaagacctgacgagtccctcgacgcctcctcccccgccacatcaaagggac
cttcctcctcctctgcccagcaagacccctccgccacctcctcccaagaccaccaggaaa
caggcctccatcgattcgggaatagtgcagtga
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