Pseudoliparis swirei (Mariana hadal snailfish): 130203224
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Entry
130203224 CDS
T09868
Name
(RefSeq) microtubule-associated protein tau-like isoform X1
KO
K04380
microtubule-associated protein tau
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130203224
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130203224
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203224
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130203224
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130203224
Membrane trafficking [BR:
pswi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
130203224
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
130203224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin-binding
Motif
Other DBs
NCBI-GeneID:
130203224
NCBI-ProteinID:
XP_056285152
LinkDB
All DBs
Position
13:complement(20564637..20591351)
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AA seq
693 aa
AA seq
DB search
MDSGNNAAGSAADATSSSEQQRQENGLQLDAVMKAESSAEEVAAVGAGVPAPSERKSAPC
GEEGQRAAAGGGGAPTAASTVLESEAAGSEGAGSEAVGSEAVGSEAAGSEAVGSEAAGSE
ANGSEAVGSEANGSEAIGSEAAGSEAAGSEAAGSEANGNLDLTAASCPPEPGSEAAGTRL
SEWTSEEPVPSPETSEGPADPQRAVSLDAAECSDGGGDAALVRTDALEDLTSIGDRGLRD
GPGESGEGAESTSRSPEAQSLPHSDPQPEGLLTSPTPPDAAPHGGSEPPDGARAAELQRT
PTLSLPVARKSLVPVALPKAQAKMDNGSAEKSQTSTKPATSPKRQTSPASRNGPSSIPVK
AGSPGPRAPGSLGGVKSQTIGIKASVRSAAHQDGSGHSSPKSPASQAPSAKAAAEANKVK
KVAVIRSTPKSPGSLKSRPPAPLAAAPMPDLKHVRSKIGSTDNMKHQPGGGKVQISHQKV
DYSGVQSKCGSKDLVTHVPGGGNVQILDKKIDVAKVQARCGSKDNIKHTPGGGKVQIIEK
KLDLSSVQSRCGSKDNMKHVPGGGNVQIVHKKIDLTNVQSKCGSKANLGHKPGGGNIEIK
NEKIDFKGQSKVGSLDNIGHVPGGGARRIESHKLSFRETAKARTDHGAEIVSLEDSPHPL
STVSSSGSLNVADAPQLSTLADQVSASLAKQGL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggactccgggaacaacgccgccggcagcgccgcagacgccacgagctcctccgagcag
cagcgccaggagaacgggctccagctggacgccgtcatgaaagccgagtcgtctgcagaa
gaagtcgccgccgtcggggccggagtgccggcgccctcagagagaaagagtgccccgtgt
ggagaggaggggcagcgcgcagcagcaggaggaggcggagctccaacagcggcgagcacc
gtgctcgagtctgaggctgccgggtctgagggcgccgggtctgaagccgtcgggtctgaa
gccgtcgggtcggaggccgccgggtctgaagccgtcgggtcggaggccgccgggtcggag
gccaacgggtctgaagccgtcgggtcggaggccaacgggtctgaagccatcgggtcagag
gccgccgggtcggaggccgccggatctgaggccgccgggtcggaggccaacggaaacctc
gacctcacggcagcctcctgccccccggagccaggcagtgaggcggcggggacgaggctg
agcgagtggacctctgaggagccggtccccagtccggagacctcggagggcccggcggac
ccccagagggccgtcagcctcgacgccgccgagtgctcggacggaggcggcgacgcggcg
ctggtccgcacagacgccctggaggacctgacgtccatcggggaccgaggcctgagggac
ggtccgggagagtctggagagggagcggagtccacgtccaggagccccgaggcccaaagt
ctgccacactccgaccctcaaccggagggcctcctcacgagccccacgccgcccgacgcc
gcgcctcacggcggttcagagcctcccgacggggctcgggccgccgagctccagagaacc
cccaccctaagcctcccggtggcccgaaagtctctggtcccggtcgctcttcccaaagct
caagcaaagatggacaacggctctgcagagaagagccaaacttccaccaaaccggccact
tcccctaaaagacagacaagccccgcctcccgaaacgggcccagctccatccccgttaag
gccggcagcccggggccccgggcccccggaagtctcggtggcgtgaagtctcaaaccatc
ggcatcaaggcgtccgtgagatcggcagcgcatcaagatgggagtggccacagcagccca
aagtcccccgcgagccaagcgccgtccgccaaggcggcggccgaggccaacaaggtcaag
aaggtcgcggtgatccgctccacgcccaaatcccccggctcgctcaagagccgcccgccg
gcccccctggcggcggcccccatgccggacctgaagcacgtcaggtccaagatcggctcc
acggacaacatgaagcaccagcccggaggcggcaaggtgcagatctcccaccagaaggtg
gactacagcggcgtgcagtccaagtgcggctccaaggacctcgtgacccacgtaccgggc
ggcggcaacgtccagatcctggacaagaagatcgacgtggccaaagttcaggctcgctgt
ggctctaaagacaacatcaagcacacgcccggcgggggcaaggttcagatcattgagaag
aagctggacttgagcagcgtgcagtcccgctgcggctccaaagataacatgaaacacgtc
cctgggggcggcaacgttcaaatcgtgcacaaaaagatcgatctgaccaacgttcaatcg
aaatgtggatcgaaggccaacctcggtcataagccaggtggtggaaatattgagatcaaa
aatgagaagattgattttaaaggtcagtctaaggtcggctccctggacaacatcggccac
gtccctggaggcggagccagacggattgagagccacaagctgagcttccgtgagactgcc
aaggctcgtacggaccacggcgctgagatcgtgtccctggaggactccccccaccccctc
agcaccgtgtcctcctccggcagcctcaacgtcgccgacgccccgcagctctccacgctg
gccgaccaggtgtccgcctctctggccaagcagggcttgtga
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