KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130203233
Entry
130203233         CDS       T09868                                 
Symbol
mtr
Name
(RefSeq) methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00270  Cysteine and methionine metabolism
pswi00450  Selenocompound metabolism
pswi00670  One carbon pool by folate
pswi01100  Metabolic pathways
pswi01230  Biosynthesis of amino acids
pswi04980  Cobalamin transport and metabolism
pswi04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    130203233 (mtr)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    130203233 (mtr)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    130203233 (mtr)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    130203233 (mtr)
   04980 Cobalamin transport and metabolism
    130203233 (mtr)
Enzymes [BR:pswi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     130203233 (mtr)
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-GeneID: 130203233
NCBI-ProteinID: XP_056285170
LinkDB
Position
13:complement(13685272..13734159)
AA seq 1268 aa
MAPTNVIQHKLEPGCQCPLESELRAVLQQRIMVLDGGMGTMIQQHRLEEEDFRGDEFREH
LLPLKGNNDLLSLTQPEIVYQIHKDYLLAGADIIETNTFSSTSVAQADYGLEHMAYRLNR
ASAELARRAADDVFKLTGCKRYVAGALGPTNKTLSVSPSVERPDFRNITFDELVEAYSEQ
VRGLLDGGADILLVETIFDTANAKAALFAIDLLFEKSYERRPLFISGTIVDRSGRTLSGQ
TGEAFVVSVSHMNPLCIGLNCALGATEMRPFIEAIGKCTTAFIICYPNAGLPNTFGDYDE
TPEVTASNLKEFATDGLVNIVGGCCGTTPGHIRALAEAVTHCQPRVPAADGYQDYMLLAG
LEPFRIGPNTNFVNIGERCNVAGSRNFAKLIMAGNYEEALSIAKAQVEMGAQVLDINMDE
GMLEGPAAMTRFCNLIGSEPDIARVPLCIDSSNFSVIEAGLKCCQGKCIVNSISLKEGEE
EFLHRAATVKRYGAAVVVMAFDEEGQAADTERKVEICTRAYELLVRKVGFNPNDIIFDPN
ILTIGTGMEEHNDYAIYFIRATKLIKATLPRARVSGGLSNLSFSFRGMEAIREAMHGAFL
YQAIKDGMDMGIVNAGNLPVYDDIDKELLLLCENLIWNRDAEATEKLLVYAQNNVKGAKK
VVQTDEWREGSVAERLEYALIKGIDKYVVEDVAECRAQVERYRRPLHIIEGPLMSGMKVV
GDLFGAGKMFLPQVIKSARVMKKAVGYLIPFMEKERQEMMALSGSTEEVDPYQGTIVLAT
VKGDVHDIGKNIVGVVLGCNNFRVIDLGVMVPCDRILREAIAHKADIIGLSGLITPSLDE
MIYIAKEMERLGVTTPLLIGGATTSKTHTAVKIAPRYSSPAIHVLDASRSVVVCSQLLDE
AVREEYFEELKEEYEEIRQEHYNSLKERRYLSLSQARGKALHIDWLSQPRPVRPQFLGTR
VFESYDLHSLLDFIDWKPFFDVWQLRGKYPNRGYPKIFNDKTVGTEARGVFDEAQQMLTQ
MIDNGSLKGRGLVGFWRAQSDGDDIRVYEGDVTAHKGTEPIGTFHGLRQQLEKDSSSSEP
YLCVSDFVAPAASGVADYVGVFAVGVFGAEELSQQFQAQGDDYSSIMVKALADRLVEAFA
EELHARVRKDLWGYSADEALQASDLHRIRYQGIRPAAGYPSQPDHTEKTAMWSLAGIQEK
TGICLTESLAMMPAASVSGLYFSNPKASYFAVGKITKEQVEDYAARKGMSMEEAERWLAP
ILGYDSEA
NT seq 3807 nt   +upstreamnt  +downstreamnt
atggctccgactaatgtcatccaacacaagttggaaccgggatgccaatgtccattagag
tccgagctgagagcggtgctgcagcaaaggatcatggtcctggacggcggtatgggtacc
atgatccagcagcacaggctcgaagaagaagacttcaggggggatgagttcagagagcac
cttctcccactgaagggcaacaacgacctcctgagcctcacacagcccgagatcgtctac
caaatacacaaggactacctgctggccggcgctgacatcatagagaccaacaccttcagc
agcacctccgtggcccaggcggactatggactggagcacatggcgtaccgcctcaaccgg
gcgtctgcggagctggcgaggagggcggccgacgacgtcttcaaactaacgggttgtaag
cgctatgtggccggggcgctggggcccaccaataagacgctgtctgtgtccccgtctgtg
gagaggcccgacttcaggaacatcaccttcgatgagctggtggaggcctactcggagcag
gtcagagggttactggacggaggagctgacatccttctggttgaaaccatctttgatacg
gccaacgcgaaggcggccttgtttgccatcgacctgctgtttgagaagagctacgagagg
agacctttattcatctccggcaccatcgtggaccggagtggacgcactctgtccggccag
acgggcgaggccttcgtagtgagcgtgtcccacatgaaccccctgtgtattggtctgaac
tgtgccttgggggcgacagagatgaggccgttcattgaagccattggaaaatgcaccacc
gccttcatcatctgttatcccaatgcaggtcttcccaacacatttggagactacgacgaa
actccagaagtaacggcctccaatctcaaggagtttgccaccgacgggctggtgaacatc
gtgggaggctgctgtgggaccactccgggacacatcagagctcttgctgaagcagtcaca
cactgtcagccacgagttcctgctgctgatggttatcaggactacatgctgctggcaggt
ctagagccgttcaggatcggcccgaacaccaacttcgtgaacatcggcgagcgctgcaac
gtggccgggtcacgcaacttcgccaagctcatcatggccggaaactacgaggaggctctc
agcatcgccaaggcccaggtggagatgggagcccaggtcctggatatcaacatggacgag
gggatgctggaggggccggcagcgatgaccagattctgtaacttgattggctctgagcca
gacatcgctcgggttcctctgtgcatcgactcctccaacttctctgtgatcgaggccggg
ctgaaatgctgccaggggaagtgcatcgtgaacagcatcagcctgaaggaaggagaggag
gagttcctgcaccgcgcggccacggtgaagcgctacggggccgctgtggtggtcatggcc
ttcgatgaggaggggcaggccgcagacacggagcgcaaagtggagatctgcactcgggcc
tacgagctgctggtccgcaaagtgggattcaaccccaacgacatcatctttgaccccaac
atcctcaccatcggtacgggcatggaggaacacaacgactacgccatctacttcatcaga
gccaccaaactcatcaaggcgacattaccaagagccagggtgagtggaggtctgtccaac
ctgtccttctccttcagagggatggaggccatcagagaagcgatgcatggagcctttctc
taccaagccatcaaggacgggatggacatgggcatcgtgaatgccgggaacctgccggtc
tacgacgacatcgacaaagagctgctgctcctgtgtgagaacctcatctggaacagagac
gcggaggcgacggagaaactactggtctacgcacagaacaacgtgaaaggagcgaagaag
gtggtgcagacggacgagtggagagaagggagtgtggcggagaggttggagtacgcgctc
atcaaggggatagacaagtacgtggtggaggacgtggcggagtgccgggctcaggtggag
cgctacaggcgaccccttcacatcatcgagggccccctgatgagcggcatgaaggtggtg
ggcgatctctttggagcgggcaagatgttcctcccacaggtgatcaagtcggctcgcgtg
atgaagaaggcggtgggctatctgattcctttcatggagaaggagaggcaggagatgatg
gcgctgtcggggtcaactgaggaagtggatccctaccagggcaccatcgtgctggcgaca
gtgaagggagacgtccacgacattggaaagaacattgtaggcgtggtgctgggttgcaac
aacttcagagtgatagacctgggcgtcatggttccctgtgatcggatcctcagagaggcc
atcgcacacaaagcagatatcatcggcctgtcggggctcatcaccccgtctctggacgag
atgatctacatcgccaaagagatggagagactgggagtgaccacgccgctgctgattgga
ggagccaccacatcaaagacgcatacggccgtgaagatcgcccctcgctactcctctcct
gctatccatgtcctggacgcctccaggagcgtggtggtgtgctcacagctcctggacgag
gcggtgagggaggagtactttgaggagctgaaggaggagtacgaggagatcaggcaggag
cactacaactccctgaaggagcgcaggtatctgtctctctcccaggccagaggcaaggcg
ctacacatcgactggctctctcagcccagaccagtgcgtcctcagttcctgggcacccgt
gtgttcgagtcctacgacctgcacagcctgctggacttcatcgactggaagcctttcttt
gacgtgtggcagctgaggggaaaataccccaacagaggctaccccaagatcttcaacgac
aagaccgttggtacggaggctcgcggagtcttcgacgaagcccagcagatgctcactcag
atgattgacaacgggagtctgaaggggcggggcctggtggggttctggcgtgcccagagt
gacggcgatgacatccgcgtgtacgaaggcgacgtcacggcgcacaaaggcaccgagccc
atcggcacgttccacggcttacggcagcagctggagaaggacagctccagttcagagccc
tacctgtgtgtgtctgacttcgttgccccggcagccagcggcgtggccgactacgtgggc
gtgttcgccgtgggcgtgtttggagccgaggagctgagtcagcagttccaggcccaggga
gacgactacagcagcatcatggtcaaagcgctggccgaccggctggtcgaggccttcgcc
gaggagctgcacgctcgcgtgcgcaaggatctatggggctacagcgcggacgaggctctg
caggcctcggacctccaccggattcggtaccagggcatcagacctgcagccggctacccc
agtcagccggaccacacggagaagaccgccatgtggagcctggcggggatccaggagaag
accggtatctgcctgacggagtctctggccatgatgcccgctgcctccgtgtccggcctt
tacttctctaaccccaaggcctcgtacttcgctgtggggaagatcaccaaggagcaggtg
gaggactacgcagccaggaaagggatgagcatggaggaggccgagcgctggctggccccc
atcctgggctacgacagcgaggcctga

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