Pseudoliparis swirei (Mariana hadal snailfish): 130203282
Help
Entry
130203282 CDS
T09868
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00514
Other types of O-glycan biosynthesis
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130203282 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130203282 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130203282 (rfng)
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
130203282 (rfng)
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
O-Glycan
130203282 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
130203282
NCBI-ProteinID:
XP_056285278
LinkDB
All DBs
Position
13:complement(14167769..14182375)
Genome browser
AA seq
387 aa
AA seq
DB search
MHRLRRPIRMHIAPVGVNKFCFLFSLAFCGLLLLLIPALQPPARQVDLPQPRPQARRARA
GLQHRVGVPGASVRAELSRTEGTGPDALSPKRGMGPGRGATPPTGKAGGPSGYRSRKPLD
FKDIFIAVKTTRKYHKSRLELLIQTWVSRHKEQTFIFTDGEDKELQTRTGVNLINTNCSA
AHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLGLLSSYHHSQDVYLGRPSL
DHAIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAEKIRLPDD
CTIGYIIEALLEVTLTHTHLFHSHLEKLQKLPTDTVLEQVTLSFGGFENRRNVVSIVGGF
SLADDPTRFKTVHCLLYPETSWCPNSA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcctccgtcggccaatcaggatgcacatagctccggtgggcgtcaacaagttc
tgcttcctgttctccctggcgttctgcggcctcctgctcctgctcatcccggccctccag
cctccggcgcgccaggtggacctgccccagccccgcccccaagccagacgggcacgggcg
ggcctgcagcaccgggtcggggttccaggagcgtctgtccgtgcggagctgagtcggact
gaaggcaccgggcctgatgcccttagtcccaagaggggcatgggccctggaagaggagct
accccccctacagggaaggccggtggaccttcaggctataggtcccggaaaccgttggac
ttcaaggacatttttattgccgtgaagacgaccaggaagtaccacaagtccagactggag
ctgctgatccagacctgggtctccagacacaaggagcagacgttcatatttaccgacggc
gaggacaaggagctgcagacgagaacgggagtgaacctcatcaacaccaactgctcggcg
gctcacacccgccaggccctgtgctgcaagatgtcggtggagtacgataaattcatcgag
tctcagaagaagtggttctgccacgtggatgacgataactacgtcatcctgcccagcctg
ctggggctgctctcctcctaccaccacagccaggatgtctacctgggccggcccagtctg
gaccatgctatcgaggctgcagagagggtcaagagtgacggatcggtgtccgtcaagttc
tggtttgccacaggtggagcaggtttctgtatcagcagaggcctggcgctgaaaatgagc
ccgtgggccagtttgggtaatttcatcagcacggccgaaaagatccgactaccggacgac
tgcaccatcggctacatcatcgaagcgctgctggaggtcaccctgacgcacacacacctc
ttccactcccacctggagaagctgcagaagctgcccaccgacactgtgctggagcaggtc
actctaagctttggaggcttcgagaacagaagaaatgtggtcagcattgttggagggttt
tcattggctgatgaccccacgaggttcaagacggtgcactgcctcctctacccagagacc
agctggtgcccgaactcagcctga
DBGET
integrated database retrieval system
