Pseudoliparis swirei (Mariana hadal snailfish): 130203359
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Entry
130203359 CDS
T09868
Symbol
trpm2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130203359 (trpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130203359 (trpm2)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
130203359 (trpm2)
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130203359 (trpm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LDcluster4
Motif
Other DBs
NCBI-GeneID:
130203359
NCBI-ProteinID:
XP_056285446
LinkDB
All DBs
Position
2:complement(12015937..12031916)
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AA seq
1470 aa
AA seq
DB search
MLPRLENEVHPQNTGEQPRVNKLVFKRVVHSIKKQCAFTSWTKENIHKKECCFFEKGDSE
DVCKCGYSKTDHVDEAIKPEDFAGESWDKHRHAHEVPTDAFGDISFGGLGQKTGQYARVS
TDTSPDTLYQLLTEQWKLPPPNLLISVTGGAKNFYLKARLKSMFHRGLIKVAQTTGAWII
TGGTHAGVMKHVGRAVRDHGLSRSTQGQIVAIGVATWGIIHNREALVHSEGCFPAHYEMD
IKGQGRLSCLDNNHTHFLLVDDGTHGQYGVEIELRSRLEKCISRKHLGNKEGCMTIPAVC
VVLDGGPGTLHTIYNAMLNGTPCVVLEGSGRIADVISQVAGLPLTRVTIALIHQLMKKFF
GKEYDNFPHVKIIEWTKKIQDIIRMSQWLTIFRTSEDNHGDVDVAILQALLKASRNSETL
GMESWKRQLELAITWNRVDLAETEIFTEESQWKSCDLHWAMFSALVGNKPQFVSLLLENG
VSLRDFLQDEDTLCELYKQLPGGIFLRKLAKRVHRSCGSRRKALRIRPQAHLDHGEMISM
THVSDEVRHLLGSFTHALYPPPIVTYSMELSTSISLSKSLTVSQEPLEEDHADAPRDAGG
DLFLWAVVQNNKELAEIAWELCRDCMSAALAASKILKTMAEEGRDADEAEDMQELANHFE
NHAIGVFSQCHNSDEERARKLLVRVSPFWGRTTCLRLALEADDKSFVAQSGVQALLTQIW
CGELSVDNPVWRVLVCIVFFPLIYTGFLIFRRDEIIHREAEKKEEIKTVETVTGSTLRTN
SRSRDLSGLRRLKPLSSWYRLVHLYSSPQVKFYWNIVSYFAFLFLFAVVVMIDFQATPSP
GEMLLYIWLLSLVCEEVRQLFYDPDGFGFHKKARMYISEVWNILDVLSILLFILGLAFRL
TTELFYAGKILLCIDFVVFCLRFMAIFTISKTLGPKIIIVRRMMKDMFFFMFLLSIWVVA
YGVAKQGILIDNDNRLDWIFRGAIYEPYLIIFGNFPTNIDYAAFDLNSCSLTGSDPLKPK
CPVLNENQTPAFPEWLTITMLCVYLLFANILLLNLLIAIFNFTFQTVQDNTDRIWKFQRY
ELIKEYHSRPAAPPPFIIFSHFYFFIRNVVLCRPPIISKEFKRELPQMEEEELLSWEALM
KDRYLLSTQQGQSQSMERRILDTAQKVTTINDRLDREEETSSPAVVQRLARLEEQVVQSA
KALQWIMDSLKCQGYAAKEAQPQMLTTSDESSDMLTNASEKEDGFHVKARQLYYPDSKLT
RFPVPEEKVPWEVSFSSYMPVYYASEASGDHVDGPESEALHNYRNPGGRTGIRGRGALIR
LGPNRTADLVLTRMQDSERSVLEHLVVWDERHGTLALPGGLLQSADQLPVTLKKSMGKTL
YEKINANVSEGTKVFEGYVDDCRNTDNAWVEITVLNIHLDTTSQLTVDVSSLVASSHGAL
QWREVSSKTRLSTNQRDSLRQVAELHNRKF
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctcggctagagaatgaggttcacccgcagaacacaggcgagcagccgcgggtg
aacaagctggtttttaagcgagtggttcatagtataaaaaagcaatgcgccttcacgtcc
tggaccaaggagaacatccacaagaaggaatgctgcttctttgagaaaggagacagcgag
gacgtctgtaagtgtggctactccaagacggatcatgtggatgaagccatcaagcccgag
gacttcgcgggcgagtcctgggacaaacacagacatgcccacgaagtgcccacggatgct
tttggagacatcagctttggtggtttgggacagaagactggccagtatgcacgagtgtcc
acagacacgagcccagacaccctgtaccagttgttgaccgagcagtggaaacttccgcct
cccaacctgctgatctcagtgaccgggggagcgaagaacttctacctgaaggctcggctc
aagagcatgttccacagaggtctgatcaaagtggcccagaccacaggagcgtggatcatc
accggtggaacgcacgcaggtgtgatgaagcacgtggggcgggccgtgagggaccacggc
ctgagccgctccacgcagggccagatcgtggcgatcggagttgcaacgtggggaattatc
cacaacagggaggcgttggtgcattcagagggatgcttcccagcccattatgagatggac
atcaagggccagggccgactctcttgcctcgataacaaccacacccacttcctgttggtg
gatgatgggacccacggacaatatggagttgagatcgaactacgtagccgtctggagaaa
tgcatctccagaaagcatcttggaaacaaagagggttgcatgacgatccctgcggtgtgt
gtggttttggatggaggaccaggcactctacataccatctataatgccatgctgaatggc
acaccgtgcgtggtcttggagggctcggggagaatagcagacgtgatttcccaggtggcc
ggtctgccattgacccgggtcaccatcgccctcatccaccagttaatgaaaaagttcttt
ggcaaagagtatgacaacttcccccacgtcaagatcatagaatggaccaagaagattcag
gacatcatcaggatgtctcagtggctgacaatattcagaacaagcgaggacaatcatgga
gatgtggacgtggctatacttcaagcactactcaaagcttcgaggaacagcgagacactc
ggaatggagagctggaagaggcagctggagctggctataacctggaaccgggtggattta
gctgagacggagatcttcactgaggagagccagtggaagtcctgtgacctccactgggcc
atgttctccgccctggtcggcaacaagcctcagtttgttagtctgctgctggagaacggc
gtgagtctgagggatttcctgcaggacgaggacactctgtgtgagctctacaaacagctg
cccggcggcatcttcctccgcaagctggccaagcgggtccacagatcttgcggcagcagg
aggaaggcgctacgcatcaggcctcaagctcacctggaccacggtgaaatgatctctatg
actcacgtgtctgacgaggtgcgccacctgctgggcagtttcacccatgccctctaccct
ccccccatcgtgacatacagcatggagctgtccacgtctatatcactgtctaaaagtctg
acggtttcccaagagccactcgaggaggaccatgctgatgcaccgagggacgcgggcgga
gaccttttcctttgggccgtcgtccagaacaataaggagctggctgaaattgcctgggag
ctgtgtagagactgcatgtccgccgctctggccgccagtaagatcctgaagacaatggcg
gaggaaggaagagatgcagacgaggccgaggacatgcaagagctcgccaatcacttcgag
aatcatgccatcggtgtgttcagccagtgccacaacagcgatgaagagcgggctcggaag
ttgttggtccgcgtgtctccgttttggggaaggaccacgtgcctgaggctggcactggag
gccgatgataaaagctttgtcgcgcagtcaggtgttcaggctcttctgactcagatctgg
tgtggtgagctttcagtggacaacccagtgtggagagtgctggtctgcatcgtcttcttc
ccgctcatctacactggctttctgattttcagacgtgatgaaatcattcatagagaagct
gagaagaaggaggagatcaagacagtggagacggtaacgggaagtacacttcgaacgaat
tctcgtagccgtgacctctccggcctgaggcgcctgaagcctctgagcagctggtaccgg
ctggtccatctgtacagctctccgcaagtcaagttttactggaatatcgtgtcttacttt
gccttcctcttcctgtttgctgtggtggtgatgattgacttccaggccacgccctctcct
ggggagatgctgctttacatctggctgctctccctggtgtgtgaggaggtcagacagctg
ttttatgatcctgatggatttgggtttcataagaaagccaggatgtacatcagtgaagtc
tggaatattttagatgttctgtccatccttctctttattcttggcctcgcatttaggctg
acaactgagctgttttacgcgggtaaaatcctcctctgcatcgactttgtggtcttctgc
ctccgtttcatggccatcttcactatcagtaaaaccctggggcccaaaatcatcatagtc
aggaggatgatgaaggatatgttcttcttcatgttcctgctgagtatctgggtggtggcg
tacggagtggcaaaacaaggcatcctcatcgacaacgacaatcggctggactggattttc
cgcggggcaatttatgagccatacctcatcatatttgggaattttcccacaaatattgat
tatgctgcgtttgacttgaactcctgcagcttgactggcagcgatcctctgaagcccaag
tgtccggtgctgaatgaaaaccaaacgccagccttccccgagtggctcaccatcaccatg
ctctgtgtttacttgctctttgccaacatactgctgctcaacttgctcatagccatcttc
aactttacgttccagaccgttcaggacaacacggaccggatttggaagtttcaaagatac
gagctgatcaaggagtaccacagccgccctgctgccccgcctcctttcatcatcttcagc
catttttacttcttcatcaggaacgtggtgctgtgcaggccccccatcataagcaaggag
tttaagagagagctacctcagatggaggaagaggagctgttgtcctgggaggccttgatg
aaggacaggtatctgctatccacacagcagggccagagccagagcatggagcggcgcatc
ctggacacggcccaaaaggtgaccaccataaatgatcgactggatagggaagaggagacg
agctctcctgccgtggtccagagactggctcggctagaggagcaggtcgtccagtcggcc
aaagccctgcagtggatcatggacagtctgaaatgtcagggttatgcagcaaaagaagca
caaccacaaatgttgaccacgtcagacgagtcctctgacatgttgacaaacgcgtcagag
aaggaggacgggttccacgtgaaagcccggcagctttactacccggacagcaaactcacg
cgctttcctgtgcctgaggagaaggtgccatgggaggtcagcttcagctcatatatgccg
gtttattatgcctctgaagccagtggggaccatgtggatggaccagaatcagaagcctta
cataattacagaaacccaggaggaaggaccggcatcaggggccgaggtgcactaatccgc
ctcggtccaaatcgaactgcagaccttgtgctcacacgcatgcaagacagcgagagatcc
gttctggagcacctggtggtttgggatgagcgccatggaaccttggctctacccggggga
cttctccagtctgctgatcagttgccagtgacgctgaagaaaagcatggggaagacgctg
tatgaaaagataaacgcaaacgtttcagagggaacaaaggtgtttgagggttatgtggac
gactgcaggaacacagataacgcctgggtggaaatcactgtcctaaacattcacctggac
acaacgagccagttgacagttgatgtcagcagcttggtggcgagcagccatggcgctctt
cagtggcgggaggtgagcagcaaaacccgactgagcacaaaccaaagagactctctgcgg
caggttgcggagctgcacaacaggaagttctga
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integrated database retrieval system
