Pseudoliparis swirei (Mariana hadal snailfish): 130203897
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Entry
130203897 CDS
T09868
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04140
Autophagy - animal
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130203897 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130203897 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203897 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130203897 (plekhm1)
Membrane trafficking [BR:
pswi04131
]
SNARE
SNARE associated proteins
Others
130203897 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
130203897 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
130203897
NCBI-ProteinID:
XP_056286330
LinkDB
All DBs
Position
13:9746517..9758542
Genome browser
AA seq
1065 aa
AA seq
DB search
MPFATQMPDTPPEAKDVKQIKEKLAQSLKALQKRYVASDAVVTSDDRDANLLCCALEAIF
IHGIKSKYIRLEAGGRSRKGDRGALPEPFFWSLLKTITHRDVVKELEKISFVGTDVGRCR
AWLRLALNHGLLECYLASLFREGSKLRAYYQPSALLLNTEEREVLLSYLQGLASLTFSLS
YKSAVLNIWTTTPLALAGLCPLSQADTIELPLNGGDLPNSKPTLKESWDTVSQSSSSSDA
QDMQRGCPVMLTGKGTSVLQGGSTALNSSNLSLDTTGSSQLSSSLSSDSLLQGQDPRSPT
GEPWSSSDLDTPINVTVSTKKPQKDSQTEFRESGHCSQDSTREDSFVSSAGADQYSETAV
FSGSDSETQGPPTSSQVPNSVLADSEPPATPDENRVNTSPPEVCIDTASEFHLDTDRFST
LSEPMEPGDEVHTTGVQESPEPLQVENEAEPSVHHGSRCSISILSKKLSSDSLSHSRSWI
SEDDIYKPHLEEVSDPDEAPPPAELKVSQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGA
MGMWRDHYCELSPFEFRLYLNAEERTCCDNCFLVRCEDARVASPDGRFEVAFPGKRLYLR
AANRGEAEDWVDRILEAVIKCRPAPHMDEQWEVLQPPCENGVEASSSVPASPERGPSSPD
AAGQEAPPPALQELDWTRTADLENDAIKEAVLYFSTDPEARTWAPMVFSLSLEALKVFQV
QEGRKLLRQTLPVEEIRDVVPDVSQGGPAFFKLLTVRETLRVRAENPEEARSWRVLIRGA
LDSYLESGEDEGSVEPGVVCPAKTGNLHRLVKHRLKEDGALLVHLCTVPSEKGLDAQSFK
CAGCPQPIGPSLGRARLCEFSGQYYCDSCHHGDTTVIPSRMVHNWDLAQREVSKKALHLL
AQVEQEPLLNLEQLNPDLVTHVESMAQAHNLRKRLRLLGDYLLTCRSGACKKLQARMEQR
TYLLESSHLYSVMDLRQIAEDQYVTYLITLLQVASNHVFHCDLCTQRGFICQICHANDII
FPFQLNITTRCKDCKAVFHLACKADGVSCPRCQRMKKYLESYPHF
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgccattcgccacacagatgccagatacgccacccgaggccaaagatgtcaaacagatc
aaggagaagttggcgcagtcgctcaaggccctgcagaagagatacgtagcgtcggacgca
gtggtcaccagtgacgaccgggatgcgaacctcctctgctgtgccctggaggccatcttc
atccacggtatcaagagcaagtacatccgcttggaggctgggggccggagtaggaagggg
gaccgaggagccctcccagagcctttcttctggagcctcctcaagaccatcacccaccgt
gatgtggtcaaagagctggagaagatcagcttcgtgggcacggacgtgggtcgctgccga
gcctggctgcggctggccctcaaccacggcctgctcgagtgctacctggcgtcgctgttc
cgcgagggctccaagctgcgggcctactaccagcccagtgccttgctcctgaacacagag
gagcgggaagtcctgctcagctacctccagggtctggcctcgcttacattcagcctctcc
tacaagtcagccgtcctcaacatatggaccaccacacctctggctctcgccggactctgc
cccttgtcccaagcggacacgattgagctgcccctcaacggcggagacctccccaactct
aagcccacgttgaaagaatcgtgggataccgtgtctcagtcgtcgagctcctcagatgca
caggatatgcagagaggctgcccggtgatgctgacggggaaagggacaagtgtattacaa
gggggaagtactgcactcaactcgtctaatttaagcctggacactacgggctcctcccag
ctctcctccagcttgagctccgacagcctcctgcaggggcaggacccccgtagcccgaca
ggagagccgtggtcttcaagtgacctggacacgcccattaatgtcaccgtcagcaccaag
aagccacagaaggattctcaaaccgagttcagggagagtggccactgcagtcaggactcc
acgcgtgaagactccttcgtctccagcgcgggggcagatcagtactcggagacggcggtt
ttcagtggctccgacagcgagacccaggggcccccgacatcatcccaagtcccaaactct
gtgctggctgattcagagccaccggcaacacccgatgagaaccgcgttaacacctctccc
ccggaagtgtgtatcgataccgcctctgaattccacttggacacagacaggttttctacg
ctcagtgagcccatggagcctggagatgaagtacataccaccggtgttcaggagagtccg
gagcctctccaggtggagaatgaagctgagccttcagttcatcacggctcacgttgctcc
atcagcatcctgagcaagaagttgtcctcagattctctatcgcattctcgttcctggatc
tctgaggatgacatctacaagccacacctggaggaggtgtctgaccccgatgaggcgcct
ccccctgccgagctcaaggtctctcagtcaccgcccagcgtcgtccatcgcaggcaaata
gggctgtccaaccctttccgcggcttgctgaagctcggccacctggagcgccgcggcgcg
atggggatgtggcgcgatcattactgtgagctgtcgcccttcgagttccgtctgtatctc
aacgcagaggagcgcacgtgctgcgacaactgcttcctggtgcgatgcgaggacgcccgc
gtcgcctcgcccgacggacgcttcgaggtggccttccccggcaagcggctctacctccgg
gcggcgaaccgcggcgaagccgaggactgggtggaccggatactcgaggccgtcatcaaa
tgccgcccggcgcctcacatggacgagcagtgggaggtgctgcaacccccttgcgagaac
ggcgtggaggcgtcgtcctccgtccctgccagtccggagcgaggtccgtcatccccggac
gccgccgggcaggaggctcctcctcctgccctgcaggaattggactggactcggactgcg
gatttggaaaatgacgcaatcaaagaagcggttctgtacttctccacggatccagaggct
cggacgtgggcgccgatggtcttctccctctccctggaggctttgaaagtgtttcaggtc
caagagggaaggaagctgctgcggcaaacgctccccgttgaggagatccgggacgtggtg
ccggacgtgtctcagggagggccggcctttttcaaactcctgacggtcagggagacgctg
agggtcagggcagagaacccagaggaggctcgctcctggagggttttgatccgaggagct
ctggactcgtacctggagagtggggaggacgaaggctccgtggagccgggggtggtctgc
cccgctaaaactggtaatctccacagattggtgaagcaccgactcaaagaggacggagca
cttctcgtgcatctgtgcacggttccctcggagaagggtctggacgctcagagcttcaag
tgtgcagggtgtcctcagccgatcggcccgtccctgggcagagccaggctgtgtgagttc
tcgggccagtactactgtgactcctgtcaccacggcgacaccaccgtcatcccctcacgc
atggtgcacaactgggacctcgcacaacgagaggtgtctaagaaggccctccatctgctg
gctcaggtggagcaggagcctctgctgaacctggagcagctgaatcccgatctggtgacg
cacgtcgagtccatggctcaggcacacaacctgcggaagaggctccgcctgctgggcgac
tacctgctcacctgccgcagtggagcctgcaagaaactccaagccagaatggagcagcga
acgtacctgctggagtcgagtcatctgtacagtgtcatggacctacgacagatagcagaa
gatcaatacgtaacctacctgatcacgctgctgcaagtcgcctccaaccacgtgttccac
tgcgacctgtgcactcagcggggcttcatctgtcagatatgccacgctaatgacatcatc
ttcccctttcagctcaacatcaccaccaggtgtaaagattgtaaagctgtgtttcacctg
gcctgcaaggcggacggggtctcgtgtcctcgctgtcagcggatgaagaaatacctggaa
agttatcctcacttctga
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