Pseudoliparis swirei (Mariana hadal snailfish): 130204421
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Entry
130204421 CDS
T09868
Name
(RefSeq) radixin isoform X1
KO
K05762
radixin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04517
IgSF CAM signaling
pswi04530
Tight junction
pswi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130204421
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130204421
09142 Cell motility
04810 Regulation of actin cytoskeleton
130204421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130204421
04147 Exosome [BR:
pswi04147
]
130204421
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
130204421
Exosome [BR:
pswi04147
]
Exosomal proteins
Proteins found in most exosomes
130204421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERM_C
FERM_M
ERM_helical
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
130204421
NCBI-ProteinID:
XP_056287121
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Position
14:complement(9195870..9211327)
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AA seq
584 aa
AA seq
DB search
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLK
LNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLLFLQVKEAILNDENYCPPE
TAVLLASYSVQAKYGDYNKDAHKPGYLTHDRLLPQRVLEQHKLTKEQWEDRIQTWHEEHR
GMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTQLWLGVDALGLNIYEHEDKLTPKIGF
PWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTI
EVQQMKAQAREEKHHKQMERAQLENEKKKREHAEKEKERIEHEKDELMEQLTQIEEQTMR
AQKELEEQTRRALGLEQERRRAREEAERLERDRQSAEEAKAELARQAADQQKTQEQLAAE
LAEFTAKIALLEEAKRKKDDEATEWQYRALSAQEDLEKTKEELKTAMTVVSAPPAGNVEN
EHDDHDEQDENHTEASAELSYEGVSQLDLRSEEARVTEAQKNERVKKQLQTLSSELADAR
DETKKTQNDVLHAENVKAGRDKYKTLRQIRSGNTKQRIDEFESM
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaccgatcaacgtccgtgtgaccaccatggatgcagagctggagtttgccatc
cagcccaacacaacaggaaagcagctctttgaccaggtggtgaagacggtgggactgcgg
gaggtctggttcttcggcctccagtatgtggacagtaaaggttacagtacttggctcaaa
ctcaataagaaggtgactcagcaggatgtgaagaaggagaacccgctgcagttcaagttc
agggccaagttcttccctgaggatgtctctgaggaactcattcaggagatcacccagaga
ctcttattcctgcaggtgaaggaggccatcttgaacgatgagaactactgtcccccggag
acggcggtgctgctggcgtcgtactcggtccaggccaagtatggcgactacaacaaagat
gcccacaagcccgggtacctcacccacgacaggctgctgcctcagagagttctggagcag
cacaagctgaccaaggagcagtgggaggaccggatccagacctggcacgaagaacaccga
ggaatgctccgagaggactccatgatggaatatcttaaaattgcccaggacttggagatg
tacggcgtcaactactttgagatcaaaaacaagaagggcacacagctgtggctgggcgtg
gacgcccttggcctcaacatctacgagcacgaagacaagttgacgccaaagatcggcttc
ccctggagtgagattcgaaacatctctttcaacgacaaaaagtttgtcatcaagcctatc
gacaagaaggcgcctgactttgtgttctacgcccctcggctgcgcatcaacaagcgcatc
ttggcgttgtgtatgggtaaccacgagttgtacatgaggaggaggaagcccgacaccatc
gaggtgcagcagatgaaggctcaggcccgggaggagaagcaccacaaacagatggagagg
gctcagctggagaatgagaagaagaagcgagagcacgcagagaaagagaaggagaggata
gagcacgagaaggacgagctcatggagcagctgacgcagatcgaagagcagacgatgagg
gctcagaaagagctggaggaacagacccgccgggccctgggcctggagcaagagaggagg
agagcgagggaggaggccgagaggctggagagagatcgccagtcggccgaggaggccaag
gcggagctggccagacaggctgccgaccagcagaagacccaggaacaactggctgccgag
ctggccgagttcacagccaagatcgctctgctggaagaagccaagaggaagaaggacgac
gaggccaccgagtggcagtacagggccctgtcggcccaggaggacctggagaagaccaag
gaggagctgaagaccgccatgaccgtggtgtccgcgccgccggccggcaacgttgagaac
gagcacgacgaccacgacgagcaggatgagaaccatacggaggccagcgcagagctctcc
tacgagggcgtgagccagctggacctccgcagtgaagaggcgcgcgtcactgaagcccag
aagaacgagcgggtgaagaaacagctgcagacgttgagctcggagttggccgatgccaga
gacgaaaccaagaagacgcagaacgacgtgctgcacgcggagaacgtgaaggccggccga
gacaaatacaagacgctgcgccagatccgatcgggcaacacgaagcagcgcatcgatgag
tttgagtccatgtga
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