Pseudoliparis swirei (Mariana hadal snailfish): 130204800
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Entry
130204800 CDS
T09868
Symbol
raph1b
Name
(RefSeq) ras-associated and pleckstrin homology domains-containing protein 1b
KO
K23488
Ras-associated and pleckstrin homology domains-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130204800 (raph1b)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
130204800 (raph1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA_2
RA
PH
PI3K_rbd
PH_11
RBD
Motif
Other DBs
NCBI-GeneID:
130204800
NCBI-ProteinID:
XP_056287741
LinkDB
All DBs
Position
14:complement(6129306..6165103)
Genome browser
AA seq
1655 aa
AA seq
DB search
MEQVSDDELDHGAEEDSDKEDQDLDKMFGAWLGELDKLTQSLDDGRPQKPLQKAPLRQET
NMANFSYRFSMYNINEALNQGDSVDLDALMADLCTIEQELNTISKPNSASHGQNKGQQRA
PGGRSASTKHTGTGGGGSSGGSASSSTRASPANTVRGGSSLNARPAAANISLDDITSQLE
KASLSMDEAARQTSSSSSSSSSSFSSTTLRRPSSGSSGGGQHRRTGSAGAVSEQEAPSQR
SSVNSACASASSMDSLDIDKVTAGGEAEGQSSPSTQGQNQASTEHSYLDRETSLILKSIA
GKPSHLLTKEEQAAKLKAEKIRVALEKIKEAQVKKLVIRVHMSDESSKTMMVDERQTVRQ
VLDSLLDKSHCGYSPDWSLVETINELQMERIFEDHENLVENLLNWTRDSHNKLMFIERIE
KYALFKNPQNYLLGRKETSEMADRNKEALLEECFCGGSVSVPEIEGILWLKEDGKKSWKK
RYFLLRASGIYYVPKGKAKTSRDLACFLQLDHVNVYYGQDYRSKYKAPTDYCLALKHPQI
QKKSQYIKYLCCDDVRTLHQWVNGIRIAKYGKQLHVNYQEAMKRTEAAYDWSSLSTSSIR
SGSSSASNPESQSNHSGHSDSGVDTGSSHGRSQSVVSSIFSEAWKRGTQIEESSKHMRME
STRGATLPHASHSHRHHSQHSADHPALTPPPQLQVQPQPLQQPPPQHQHPPTHPQTPTQA
TQHQSPQHQSPQHLPPQHLPHNICLHSISSPNICPPSICPPNICPPNICLHSICPPTSAP
PTSASTTSASTASAPPTSASTASAPQHLPPQHLPPQHQLPQHLPPQHQLPQHLPPQHQSP
QHLPSQNHLPQHQPPQHLPPQHSPPQYQPPQQALRPQQSPQPQPVGSYNHIAPPPQQQQL
APPAPPPPPPPPPPPLPPVQAVSHHSPAPTMYKFSTITRLQNQMAAQSAGHHRLPGHLHV
IGHQVLPRSPPAAQVPLRPNVNHIAARTNVPPPPPPPPPPTMPAPGSAAAMLRLGPPGAA
TPPAFVPPPPAPPAPQTDGVAFPPPPSPSPPPPCAPSPVSQPLYPNGPRHALKERFPSPP
RDLLPPNALEESAPLAPAPPPPPPPPPPPPPQQFPVPVQFPPPPAPPPAPPKTFNPGFFP
HTAPKPVSPVSPFPPAPPPAALAGPTPPPPPPPPPPAPFKKQFSLQAGHISGHPPPTLPK
QHSLSKQTAAPAMSLVKQLASQFPGASSPAANQAEIPKAPLSPPAVKTKPRWQPGGGQQL
QSPEFPPPPPDGSVGFPAAAAAPPPPPPPPPPPLAPVTGPTPPPPPPPPPPLAPVTGPTP
PPPPPPPPPLAPVTGPTPPPPPLPPGNLGSPMRRSPPGSSNFGGKKPPPAPQRTSGAKFN
GSASYEESRKNLLCKFAPQNTAPSSSSPGPASSSGSPSKDPSTGPPAPPKPGKLNLANLP
MGLHSKMSQVKHTGGDFPCPPPDCAYFPPPPPASELFPPPPPPGSDGHSGGPPRVAVVNP
QPQAPPPPPPVPLVSNSTWGKSSLKKTPPPTLVRRSNATPEPPPLSPPPPTSPKGSSGQP
NFLDDLHRTLKRKSVGRQGSLNPAGLAGKSDPVGAVDDTALPPPPPELLLDQGKQSNGGN
GAYMSGNLSGYATLRRGPPPAPPKRGDTTKLTGEC
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtatcggacgatgagctggaccatggagcggaggaggacagcgataaggag
gaccaggacctggacaagatgtttggggcttggcttggagagctggacaagctgacgcag
agtctggatgatggcaggcctcagaaaccactgcagaaggctcctctcaggcaggagacg
aacatggctaacttctcctaccgcttctcgatgtataacataaacgaggcgttgaaccag
ggcgactcagtggacctggacgccctgatggccgacctgtgcaccatcgaacaggagctc
aataccatctccaaaccaaactctgcgtctcacggccagaacaaaggccagcagcgggcc
cctgggggccgcagtgccagcaccaagcacacaggcaccggtggagggggaagcagcgga
ggcagcgccagcagcagcacccgggcgtcgccggccaacacggtgcgcggcggcagcagc
ctcaacgcccgcccggcggccgccaacatctccctggacgacatcacctcccagctggag
aaggcctctctcagcatggacgaagcggcacgccagacctcctcctcctcttcctcctcc
tcctcctccttctcctccacgacgctccggcggccctcgtcggggtcgtccggcggcggg
cagcacaggaggacgggctcggcgggcgccgtcagcgagcaggaagcgccgtcccagagg
tccagcgtgaattcggcgtgcgcctcggcgtccagcatggactccctggacatcgacaaa
gtgacggcggggggagaggcggagggccagagcagcccgagcacgcaaggacagaaccag
gccagcacagagcactcctatctggaccgagaaacctcgctcattctgaaaagcatagca
ggaaagccttctcacctcctgaccaaggaggaacaagccgccaaattgaaggcagagaag
atccgagtcgccctggaaaagatcaaggaggcgcaggtcaaaaagctggtgatcagggtc
cacatgtcggacgagagctccaagaccatgatggtggatgagcggcagacggtcaggcag
gtgctggacagcctgctggataagtcgcactgtggctacagccccgactggtctctggtg
gaaaccatcaatgagctgcagatggagcggattttcgaggatcatgagaacttggtggag
aatctattaaactggacccgggacagccacaacaagctgatgttcatcgaacgcatcgag
aaatatgccctcttcaagaaccctcagaactacttgctggggcggaaggagacgtcagaa
atggccgacaggaataaagaggcgttgctagaggagtgcttctgtggcggctcggtgtcg
gtgccagagatcgagggcatcctgtggctgaaggaggacgggaagaagtcgtggaagaaa
cgctacttcctcctcagagcttcggggatctactacgtccccaaaggcaaagccaagaca
tcccgagatctcgcgtgcttcctgcagctggaccacgtgaacgtgtactacggccaggac
taccgcagcaaatacaaggctcccaccgactactgcctggccctgaagcatccccaaatc
cagaagaagtcccagtacatcaagtacctgtgctgcgatgacgtcaggaccctgcaccaa
tgggtgaatggaattcgcatcgccaagtatggcaagcaactacatgtgaactaccaggag
gccatgaagaggacggaggcggcctacgattggtcctcgctctcgacctcgagcatccga
tcgggctccagttctgccagcaatcctgagtcccagtctaatcactcgggccactcggac
agtggcgtggacacaggctcgtctcacggccggtcccagagtgtggtgagctccattttt
tccgaggcctggaagagaggtacccagatcgaggaaagctccaagcatatgagaatggag
tcgaccagaggggccacgctgccgcacgcttcccacagtcaccggcatcacagccagcat
tcagcggaccacccggccctgacgccccctccccagcttcaggtgcagccgcagcccctc
caacagcccccgccgcagcatcagcacccgccaacgcacccccagacaccgacccaggcg
acgcagcatcagtccccccaacatcagtccccccaacatcttcccccccaacatctgccc
cacaacatctgcctccacagcatcagctcccccaacatctgcccccccagcatctgcccc
cccaacatctgcccccccaacatctgcctccacagcatctgccccccaacatctgccccc
cccacatctgcctccacaacatctgcctccacagcatcagctcccccaacatctgcctcc
acagcatcagctccccagcatctgcccccccaacatctgcctccacagcatcagctcccc
caacatctgcctccacagcatcagctcccccaacatctgcctccacagcatcagtccccc
cagcacctgccttcccagaaccatctccctcaacatcagcctccccaacatctgccccct
caacattcccccccccagtatcagcccccccaacaggctctgcgcccccagcagtcgccg
cagccgcagcccgtcggcagctacaaccacatcgcgcccccgccgcagcagcagcagctg
gctccgccggccccccctccccctccgccgcctccccctcctcctctgcccccggtgcaa
gcggtgtcgcaccactcaccggctcccaccatgtacaagttcagcaccatcacccggctg
cagaaccagatggccgctcagtctgccggtcaccaccggttgcccggtcacctccacgta
atcgggcaccaagttctgccccggagtccgcccgcagcccaggtgcccctccgacccaac
gtgaatcacattgcggcgaggaccaatgtcccgcctccccctcctccacccccgccaccg
accatgccggcccccgggtcggccgcggcgatgttgaggctgggccctcccggcgcggcc
acgccgcctgccttcgttccgccgcccccagcgcctcctgcgccacagacagacggagta
gcatttcctccccctccttctccttctcctcctccaccttgtgcaccgtctcccgtgagc
cagccgctgtaccccaacgggccgaggcacgccctgaaggagaggttccccagcccgccg
cgggacctcctgcccccaaacgccctcgaggagtccgcgccgcttgcccctgctcctccg
cctcccccacccccgccgcctcctcctcctccccagcagttcccggtgccggtccagttc
ccaccgccccctgcgccgccacccgcgccgcccaaaaccttcaacccgggctttttccct
cacactgcccccaaaccggtgtcgcccgtctctccctttccccccgccccgccccccgct
gccctggccggcccgaccccgccgccacctccgccccctcctccacccgcgcccttcaag
aagcagttcagcctccaggcaggccacatctccggccacccccctccgactctgcccaag
cagcacagcctgtcgaaacaaacagccgctcctgccatgtctttggtgaagcagctcgcc
agtcagtttccaggagcttcatcccctgcagccaatcaggcggagatccccaaagccccc
ctttccccccctgcagtcaagaccaaaccaagatggcagccggggggcggccagcagctg
caatctccagagttccctcctcctcctccagacggcagcgttggcttccccgccgccgcc
gccgcacctcctccgccacctcctcctccaccacctcccctagccccggtcacgggccca
actccacctcctcctcctccgccaccacctcccctcgctccggtcacgggcccaactcca
cctcctcctcctccgccaccacctcccctcgctccggtcacgggcccaactccacctcct
cctcccctccctcctggaaacctgggctcccccatgcggaggtcgccccccgggtcctcc
aatttcggaggcaagaaacccccccccgccccgcagaggacctccggcgccaagttcaac
ggctcggcttcctatgaggaatccaggaaaaacttgctctgcaagtttgctccccagaat
actgccccctcctcctcttcaccaggtcccgcctcctccagtgggtccccttccaaggac
ccttcgactggaccgcctgctcctccgaaaccaggcaagctcaacctggccaacctgccc
atgggactccactctaaaatgagccaggtaaagcacacgggtggggacttcccttgcccg
ccacctgactgcgcttactttccacctcctccgccggcctcggagctcttcccccctcct
ccgcctcctgggagcgacggccatagcggaggacctcctcgggtcgccgtggtcaacccc
cagccccaggctccccctcctcctccgcctgtcccccttgtgagcaactcgacatggggg
aagagctcgctgaagaagactccgccgcccacgctcgtgcggcgtagtaacgccaccccg
gagcctcctccgctgtcgccgcctccacccacctccccaaagggcagctccggccagccc
aatttcctggatgatctccaccggacactgaagcgaaagtcagtgggtcgccaaggttct
ctcaacccggccggcctcgcgggcaagtctgaccccgtgggagctgtggacgacacggcg
ctgcctccgccgccccccgagctgctcctggaccagggcaagcagagcaacggaggaaac
ggcgcctacatgtccggaaacctctcaggctatgcaacactacgacgaggacccccaccc
gcaccacccaaacggggggacacgaccaaacttactggcgagtgttga
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