KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130204860
Entry
130204860         CDS       T09868                                 
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010  MAPK signaling pathway
pswi04137  Mitophagy - animal
pswi04141  Protein processing in endoplasmic reticulum
pswi04210  Apoptosis
pswi04217  Necroptosis
pswi04621  NOD-like receptor signaling pathway
pswi04622  RIG-I-like receptor signaling pathway
pswi04920  Adipocytokine signaling pathway
pswi05132  Salmonella infection
pswi05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130204860 (traf2b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    130204860 (traf2b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    130204860 (traf2b)
  09143 Cell growth and death
   04210 Apoptosis
    130204860 (traf2b)
   04217 Necroptosis
    130204860 (traf2b)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    130204860 (traf2b)
   04622 RIG-I-like receptor signaling pathway
    130204860 (traf2b)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    130204860 (traf2b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    130204860 (traf2b)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130204860 (traf2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130204860 (traf2b)
   04121 Ubiquitin system [BR:pswi04121]
    130204860 (traf2b)
Enzymes [BR:pswi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130204860 (traf2b)
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     130204860 (traf2b)
Ubiquitin system [BR:pswi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    130204860 (traf2b)
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 zf-C3HC4_4 TRAF3_RING zf-RING_UBOX zf-RING_5 ATG16 zf-C3HC4_2 Sina_ZnF DUF848 Phosphatase zf-RING_6
Other DBs
NCBI-GeneID: 130204860
NCBI-ProteinID: XP_056287789
LinkDB
Position
15:14182831..14196289
AA seq 520 aa
MARISLDCPNTLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSC
GPKPCEACRQEEIYEEPFSILNCNEAFPDNAAGREIASLPARCLNQGCDWTGSIKEYEAQ
HEDRCEFEKMQCEACQTSILRTEKERHDERECEARTLNCKYCKTTFNFKEIKAHDEICLR
FPLQCKDCGKKKIPREKFTEHSKLCAKSKSACPFSDVGCKYVMDNGKLGDHEHSSTMEHL
RLLLPMVLSMSRACAEAPGQGEWQEDSGLGLYRAPEEGVATETGAAASMQSVDVEKKVNA
LENIVCVLNREVERNSMTLEAFSHQHRLDQEKIENLSNKVRQLERTVSMRDLQLSETEQL
LRELQFCTYDGIFVWKVSDFARRRQDAVAGRTPAMFSPAFYTSKYGYKMCLRLYLNGDGT
GRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS
EMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVDLTGL
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggcccgaatctcgttggactgccccaacactctaccagggatccccctgagtgtgctg
tcggtgcccatggagaataagtacaaatgtcagcagtgtctccaggtcctgaggaagcct
gtccaggctcagtgcggccaccgcttctgtgtccactgcttcaagcagctcaccagttgt
gggccgaagccttgtgaagcctgccgccaagaggagatatatgaggaacctttttccatt
ctcaattgcaatgaggcatttccagacaatgcagctggtcgagaaatagcaagtctgcct
gccaggtgtttgaaccagggctgtgattggacaggctcaataaaagagtatgaggctcag
catgaagaccgctgtgaatttgaaaagatgcagtgcgaggcctgccaaacctccatcctt
cgtacggagaaggagcgacatgacgagagagaatgtgaagcacgaacgctcaactgtaaa
tactgcaaaacgaccttcaactttaaagaaatcaaggcccatgatgagatctgtttaagg
tttcccttacaatgcaaggactgtggcaagaagaagatcccaagagaaaagttcactgag
cacagcaagttatgtgccaagtcaaagagtgcctgtccgttcagtgatgtgggctgtaaa
tatgtgatggacaacgggaagctcggcgaccacgagcacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgctgtccatgtctcgggcgtgtgccgaggctcccggtcaa
ggagagtggcaggaggactcgggtctgggtctgtacagggctcctgaggagggagtcgct
acggaaaccggagctgcagcctccatgcagtctgtggatgtggagaaaaaggtgaacgct
ttagaaaacattgtgtgcgtcttgaaccgagaggtggagcgcaactccatgacgttggag
gctttctcccatcagcatcgattagaccaggaaaagattgaaaacctctccaataaagtg
cgtcagctcgagcggaccgtctccatgagagacctgcagctgtctgaaaccgaacagctg
ctcagagaactccagttctgcacctacgacggcatattcgtgtggaaagtctccgacttc
gcccggcgcagacaggatgctgtggccggtcgaacgcctgcgatgttctccccagcgttt
tacaccagcaaatacggctacaagatgtgtctgaggctgtatttgaacggcgacgggacg
ggtcggggaactcacctctcgctgttcttcgtcgtcatgaggggaaagtgtgacgctctg
ctcaaatggccgttcagccagaaggtgactctcatgctcttggatcaaaacaacagggag
cacattatcgatgcgttccgccctgacgtcacctccacctcctttcagcggccaatcagt
gagatgaacatcgccagcggctgcccgctcttctgtccgctggctaagctggcgggcaag
agcccctacctgagagatgataccatcttcatcaaagctatcgtagacctcacaggcttg
taa

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