Pseudoliparis swirei (Mariana hadal snailfish): 130204860
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Entry
130204860 CDS
T09868
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04137
Mitophagy - animal
pswi04141
Protein processing in endoplasmic reticulum
pswi04210
Apoptosis
pswi04217
Necroptosis
pswi04621
NOD-like receptor signaling pathway
pswi04622
RIG-I-like receptor signaling pathway
pswi04920
Adipocytokine signaling pathway
pswi05132
Salmonella infection
pswi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130204860 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130204860 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130204860 (traf2b)
09143 Cell growth and death
04210 Apoptosis
130204860 (traf2b)
04217 Necroptosis
130204860 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130204860 (traf2b)
04622 RIG-I-like receptor signaling pathway
130204860 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
130204860 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130204860 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
130204860 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130204860 (traf2b)
04121 Ubiquitin system [BR:
pswi04121
]
130204860 (traf2b)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130204860 (traf2b)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130204860 (traf2b)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130204860 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
zf-C3HC4_4
TRAF3_RING
zf-RING_UBOX
zf-RING_5
ATG16
zf-C3HC4_2
Sina_ZnF
DUF848
Phosphatase
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
130204860
NCBI-ProteinID:
XP_056287789
LinkDB
All DBs
Position
15:14182831..14196289
Genome browser
AA seq
520 aa
AA seq
DB search
MARISLDCPNTLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSC
GPKPCEACRQEEIYEEPFSILNCNEAFPDNAAGREIASLPARCLNQGCDWTGSIKEYEAQ
HEDRCEFEKMQCEACQTSILRTEKERHDERECEARTLNCKYCKTTFNFKEIKAHDEICLR
FPLQCKDCGKKKIPREKFTEHSKLCAKSKSACPFSDVGCKYVMDNGKLGDHEHSSTMEHL
RLLLPMVLSMSRACAEAPGQGEWQEDSGLGLYRAPEEGVATETGAAASMQSVDVEKKVNA
LENIVCVLNREVERNSMTLEAFSHQHRLDQEKIENLSNKVRQLERTVSMRDLQLSETEQL
LRELQFCTYDGIFVWKVSDFARRRQDAVAGRTPAMFSPAFYTSKYGYKMCLRLYLNGDGT
GRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS
EMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVDLTGL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaatctcgttggactgccccaacactctaccagggatccccctgagtgtgctg
tcggtgcccatggagaataagtacaaatgtcagcagtgtctccaggtcctgaggaagcct
gtccaggctcagtgcggccaccgcttctgtgtccactgcttcaagcagctcaccagttgt
gggccgaagccttgtgaagcctgccgccaagaggagatatatgaggaacctttttccatt
ctcaattgcaatgaggcatttccagacaatgcagctggtcgagaaatagcaagtctgcct
gccaggtgtttgaaccagggctgtgattggacaggctcaataaaagagtatgaggctcag
catgaagaccgctgtgaatttgaaaagatgcagtgcgaggcctgccaaacctccatcctt
cgtacggagaaggagcgacatgacgagagagaatgtgaagcacgaacgctcaactgtaaa
tactgcaaaacgaccttcaactttaaagaaatcaaggcccatgatgagatctgtttaagg
tttcccttacaatgcaaggactgtggcaagaagaagatcccaagagaaaagttcactgag
cacagcaagttatgtgccaagtcaaagagtgcctgtccgttcagtgatgtgggctgtaaa
tatgtgatggacaacgggaagctcggcgaccacgagcacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgctgtccatgtctcgggcgtgtgccgaggctcccggtcaa
ggagagtggcaggaggactcgggtctgggtctgtacagggctcctgaggagggagtcgct
acggaaaccggagctgcagcctccatgcagtctgtggatgtggagaaaaaggtgaacgct
ttagaaaacattgtgtgcgtcttgaaccgagaggtggagcgcaactccatgacgttggag
gctttctcccatcagcatcgattagaccaggaaaagattgaaaacctctccaataaagtg
cgtcagctcgagcggaccgtctccatgagagacctgcagctgtctgaaaccgaacagctg
ctcagagaactccagttctgcacctacgacggcatattcgtgtggaaagtctccgacttc
gcccggcgcagacaggatgctgtggccggtcgaacgcctgcgatgttctccccagcgttt
tacaccagcaaatacggctacaagatgtgtctgaggctgtatttgaacggcgacgggacg
ggtcggggaactcacctctcgctgttcttcgtcgtcatgaggggaaagtgtgacgctctg
ctcaaatggccgttcagccagaaggtgactctcatgctcttggatcaaaacaacagggag
cacattatcgatgcgttccgccctgacgtcacctccacctcctttcagcggccaatcagt
gagatgaacatcgccagcggctgcccgctcttctgtccgctggctaagctggcgggcaag
agcccctacctgagagatgataccatcttcatcaaagctatcgtagacctcacaggcttg
taa
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