Pseudoliparis swirei (Mariana hadal snailfish): 130205216
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Entry
130205216 CDS
T09868
Symbol
tjp2a
Name
(RefSeq) tight junction protein ZO-2a isoform X1
KO
K06098
tight junction protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130205216 (tjp2a)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
DUF6288
Motif
Other DBs
NCBI-GeneID:
130205216
NCBI-ProteinID:
XP_056288406
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Position
15:complement(2754058..2782653)
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AA seq
1229 aa
AA seq
DB search
MEATCTTVIRQNPFIPHEQYTCSHDNTLGSQGLQDPPPSHTHTHTHTHCRSTRFACFLFR
WFCPQDPKMGFGIAVSGGRDNPNEGSGETSIVVSDVLPGGPGDGFLFENDRVIQVNAIPM
EGAVHSFAVQTLRKCGKVAKITVKRPRKVPVNAVHRPPSPVDRVFNNDYNDDYNYDQDRR
SVYSGRSAGGRDHSPERERYTDSGYQTRDYDRDYDRRDHGRSAERDPSPDRQYRRDGSRG
RALERERSPERPYHGADRSPDRRFRSERALDRPASPDRRYRSERTLDRADSPDLRHGGRG
RSFERGDQRKFEEPPMKRSGSRDRLARSPSPAAMPIPLARAAARDMEPLEKPMSIMLLKN
RPHEEYGLRLGSQLFIKEMTSTGLASRDGNLQEGDIILKINGTATENLSLSDAGKLIEKS
RGKLQLMVQRDKQQVLIRVPPMADSDSELDDISEIESYRSYSPPDGRRGHHSDLSSHSSN
ERLREKPREDPPSRLAKMGAMPTPFRLPDRAAQDKPPLQAEREEPRPETPPVPVHAAPRV
HAAPKAPLKPSIEDQEVYGPNTVMVRFHKGDSVGLRLAGGNDVGIFIAGVQEDSAAEQEG
LLTGDQIVKVNNMDFRGMVREDAVLYLLEIPKGEDVTILAQSKPEVYEDILESGRGDSFF
IRTHFEYEKEAPLSLPFSRGQIFKVTDTLYDGKLGNWLAVRSDKDNQLREKGIIPSKSRA
EQMANVQNAAGVTSGNDRGDFWRLRGQRAAKKKDLRKSREDLSAAPVTTKFPAYERVVLR
EAGFQRPVVIFGPISDAVNEKLANDMPGQFVVAKMEPKDAGSEKSSGVVRLNTIRQIIEQ
DRHALLDVTPKAVDTLNYTQWYPIVIFLNPDSKQGVKTMRSRLVPGSTRSARKLHEQAVK
LRKSCSHLFTDTVNLNAANDAWYGSVKDSIQEQQDRAVWVCDGKLEGSEEDLDLQDDRMS
YLSAMSADYLSMDSRLTSDYDDTADEGGAYTDNELDEPLDEPQPLSAIGRSSEPVLPDEK
PHPEPRARMRRSGSRERLNRDPSPPLPHFVPDPPKVRTRTDSTRSYDSHSSSTVGSDPVG
VNKPLPPPVALKPPVPRHGLPAEERGPAEDDPTNTSFLGKKMGDQIKAFEKMDHLARAQR
ILELQEAENARLEIAQKHPDIYAIPVKPPKPNLNRPQPIGSSSNPEQASRPPHSESRGYE
EDEAEYRQQLVDQTKRGYFNPQRYNDTEL
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgacgtgcacaactgtaatcagacaaaatccttttattccacatgaacaatac
acatgcagccatgataatacactgggctcacagggattacaggacccccccccctctcac
acacacacacacacacacacacactgcagatccacgagatttgcatgttttttatttcgt
tggttttgccctcaggatccgaagatgggcttcggcatcgcggtgtcgggggggcgagac
aaccccaacgagggcagcggggagacgtccatcgtggtgtccgacgtcctgccgggagga
cccggcgacggcttcttgtttgagaacgaccgcgtgatccaggtgaacgccatccccatg
gagggcgccgtgcactccttcgccgtccagaccctcaggaagtgcggcaaagtggccaaa
atcacggtcaagaggccccggaaggttccggtgaacgcggtgcaccgccccccgtcgccc
gtcgaccgggtcttcaacaacgactacaacgacgactacaactacgaccaggaccgccgc
agcgtgtacagcgggcgcagcgcgggggggcgggaccacagcccggagagggagcgctac
acggactctggctaccagacgcgcgactacgaccgcgactacgaccggcgggaccacggc
aggagcgcggagagggacccgagcccggaccggcagtacaggagggacggcagcaggggg
cgcgctctggagcgagagcgcagcccggagcggccgtaccacggcgccgaccgcagcccg
gatcggcgcttccgcagcgagcgcgccctggaccggccggccagcccggaccggcggtac
cgcagcgagcggacgctggaccgcgccgacagcccggacctgcggcacggcgggcgcggc
cgcagcttcgagcgcggcgaccagaggaagttcgaggagccgccgatgaagaggagcggc
agccgggaccgcctggcgcgctcgccgtcgcccgccgccatgcccatccctctggcgcgg
gccgccgcccgggacatggagccgctggagaaacccatgagcatcatgctgctgaagaac
cggccccacgaggagtacggccttcgtctcggcagccagctcttcatcaaagagatgacg
agcacaggactggccagcagagacgggaacctgcaggaaggagacatcatcctaaagatt
aacggcacggcgacggagaacctgtcgctcagcgacgccgggaagctgatcgagaagtcc
cgcgggaagctgcagctgatggtgcagcgggacaagcagcaggttctgatccgagtgccg
ccgatggccgacagcgactctgagctggacgacatctccgagatcgagtcgtaccgctcc
tactcgccgccggacgggaggcggggccaccactccgacctctcctcccactcctccaat
gagaggctgagggagaagccgagagaggacccgcccagcagactggcaaagatgggcgcc
atgccgacgccgttcaggcttcccgacagggccgcacaggacaagccccctttgcaggcg
gagagggaggagccacggccggagacgcctccagtcccggtccacgcggcgccgcgggtc
cacgctgctcccaaggcgccgctgaagcccagcatcgaggaccaggaggtgtacgggccc
aacacggtgatggtgcgcttccacaaaggggacagcgtggggctgaggctggcgggcggg
aacgacgtcggcatcttcatcgccggggtccaggaggacagcgccgcggagcaggagggc
ctcctcacgggagaccagatcgtgaaggtgaacaacatggacttccggggcatggtgcgc
gaggacgccgtcctctacctcctggagatccccaaaggagaagacgtgaccattctggct
caaagcaagcctgaagtgtacgaggacattttggagtcgggccgaggggactccttcttc
atccggacccactttgagtacgagaaggaggctcctctgagcctgcccttctccagagga
cagatcttcaaggtcacggacacgctctacgacggcaagctgggcaactggctggccgtc
cgctccgacaaggacaaccagctgcgggagaaaggcatcatccccagcaagagccgggcg
gagcagatggccaacgtccagaacgccgccggcgtgacgtcgggcaacgacagaggagac
ttctggaggctgaggggtcagcgggcggccaagaagaaggacttgcgcaagagccgagag
gacctgagcgccgcgcccgtcaccaccaagttccccgcgtacgagagggtggtcctacgg
gaagccggtttccagaggccggtcgtcatatttgggcccatttccgacgcagtgaacgag
aagctggccaacgacatgccgggccagtttgtggtcgccaaaatggagcccaaggacgca
ggaagtgagaagtcgtccggcgtggtgagactgaacaccatcagacaaatcatcgagcag
gaccgccacgccctgctggacgtgacgcccaaagccgtggacaccctgaactacacccag
tggtatcccatcgtcatcttcctgaacccggacagcaagcagggcgtgaagaccatgagg
agccgcctggtgcccggctccacgcgcagcgcccgcaagctgcacgagcaggccgtgaag
ctgaggaagagctgctcgcacctcttcaccgacaccgtgaacctgaacgccgccaacgac
gcctggtacggcagcgtgaaggactccatccaggagcagcaggaccgcgccgtgtgggtg
tgtgacggcaagctggaaggctcagaggaggacctggacctccaggacgaccgcatgtcc
tacctgtcggcgatgagcgccgactacctgagcatggacagccggctcaccagcgactac
gacgacacggcggacgagggcggggcttacaccgacaacgagctggacgagccgctggac
gagccgcagccgctgtccgccatcggccgctcatcggagcccgtgctgccggacgagaag
cctcatcctgaaccccgggctcgaatgaggcggtcagggagccgggagaggctgaacaga
gaccccagcccgcccctccctcattttgtccccgaccctcccaaggtgcgcactcggacc
gactccacccggagctacgactctcactccagcagcaccgtcggcagcgacccggtgggc
gtgaacaagcccctccccccccccgtggccctgaagccccccgtcccgcgtcacggcctc
ccggcggaggagcgcggccccgcggaagacgaccccaccaacacatccttcctgggcaag
aaaatgggtgatcagataaaagcttttgagaagatggaccacctggcccgagctcagagg
atcctggagctgcaggaggcagaaaatgccagattggaaatcgcccagaagcatccagac
atctacgccatcccagtgaaaccgccaaagcccaacctcaaccgtcctcagccaatcggt
tcgagctccaatcccgagcaggcctcccggccgccgcactccgagtccaggggctacgag
gaggacgaggcggagtaccgccagcagctggtggaccagaccaagaggggctacttcaac
ccgcagaggtacaacgacacggagctgtag
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