Pseudoliparis swirei (Mariana hadal snailfish): 130205732
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Entry
130205732 CDS
T09868
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00280
Valine, leucine and isoleucine degradation
pswi00650
Butanoate metabolism
pswi00900
Terpenoid backbone biosynthesis
pswi01100
Metabolic pathways
pswi03320
PPAR signaling pathway
Module
pswi_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
130205732 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
130205732 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
130205732 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
130205732 (hmgcs1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
130205732 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
130205732
NCBI-ProteinID:
XP_056289205
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Position
15:1633451..1643174
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AA seq
511 aa
AA seq
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MPGSAPLSCLGPWPKDVGIIALELYFPSQFVDQTELEQLDGVSAGKYTVGLGQARMGFCS
DREDINSLCLTVVQRLMERNDLSYVSVGRLEVGTETIIDKSKSVKTVLMQLFEDSGNTDV
EGVDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGGAGAVAML
VGPNAPLAFERGLRGTHMQHAYDFYKPDLMSEYPVVDGKLSIECYLSALDRCYSVYRNKI
HAQWQREGSEKRFSLDDFGHLLFHSPYCKLVQKSLARLMMNDFLNHPSPNTETGPFTGLD
AFRDVRLEETYFDRDVEKAFMKASASLFEEKTKPSLLISSQNGNMYTPSVYGCLASLFAE
HSASQLAGQRIGLFSYGSGFAATLYSLRVTQDHTPGSALEKLVSSLSDLKVRLASRQKVS
PAVFSDTMKLREETHHLASYVPQGRVEDLFPGTWYLTRIDDKHRREYARTPLDHDLQSEP
ELVRLATELVPSPAKKMPRIPAAGPDAAVST
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcagcaccactcagttgtttgggtccatggcccaaagacgtgggcatcatc
gctctggagctgtacttcccgtcccagttcgtggaccagacggagctggagcagctggac
ggcgtgtcggccggcaagtacaccgtgggcctgggccaggcccgcatgggcttctgctcg
gaccgcgaggacatcaactccctgtgcctgacggtggtccagaggctgatggagaggaac
gacctgtcctacgtcagcgtggggcgcctggaggtcggcacggagaccatcatcgacaag
tccaagtccgtgaagacggtcctcatgcagctgtttgaggactctggcaacacagatgtg
gagggcgtggacaccacgaacgcctgctacggggggacggccgctctcttcaatgctgtc
aactgggtggagtccagctcctgggatggccgctatgcgttggtagtagcgggcgacatc
gccgtctacgccacaggaagcgcccggccgacgggcggcgccggtgcggtggccatgctg
gtcgggcccaatgctcctctggccttcgagcgaggtctccgaggaacccacatgcagcac
gcgtacgacttctacaagcccgacctgatgtccgagtatcccgtggtggacgggaagctc
tccatcgagtgctacctgagcgccttggaccgctgctactccgtgtaccgcaacaagatc
cacgcgcagtggcaacgagagggttcagagaagcgcttcagcctggatgacttcggccac
ctcctctttcactctccgtactgcaagctggttcagaagtctctggcccgactgatgatg
aacgacttcctgaaccacccgagccccaacacggagaccgggcccttcacgggcctcgat
gccttcagggacgtgcggctggaggagacgtactttgaccgcgacgtggagaaggccttt
atgaaggccagcgcctcgctgtttgaggagaagacgaagccgtcgctgctcatctccagc
cagaacgggaacatgtacacgccctccgtgtacggctgcctggcctcgctgttcgctgag
cactcggcctctcagctggccggccagcggatcggactcttctcttacggctcaggattc
gccgccacgctgtattctctccgggtcacacaggaccacacgcccgggtccgctctggag
aagctggtgtccagcctcagcgacctgaaggtccggctggcctccaggcagaaggtgtcg
ccggccgtgttctccgacaccatgaagctgagagaagagactcaccaccttgccagctac
gtgcctcagggccgggtggaggatctgttcccggggacctggtacctcacgcggatagac
gacaagcaccgccgcgagtacgcccgcacgcctctggaccacgacctgcagtcggagccg
gagctggtccgcctcgccaccgagctcgtccccagtccagccaagaagatgcctcgcatc
cccgccgccggccccgacgccgccgtcagcacctga
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