Pseudoliparis swirei (Mariana hadal snailfish): 130205915
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Entry
130205915 CDS
T09868
Symbol
flt1
Name
(RefSeq) vascular endothelial growth factor receptor 1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04020
Calcium signaling pathway
pswi04510
Focal adhesion
pswi04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130205915 (flt1)
04020 Calcium signaling pathway
130205915 (flt1)
09133 Signaling molecules and interaction
04518 Integrin signaling
130205915 (flt1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130205915 (flt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130205915 (flt1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130205915 (flt1)
Protein kinases [BR:
pswi01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
130205915 (flt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
VEGFR-1-like_Ig-like
Ig_2
ig
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
Ig_PDGFR_d4
C2-set_2
C1-set
Ig_4
Ig_C17orf99
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
130205915
NCBI-ProteinID:
XP_056289443
LinkDB
All DBs
Position
16:complement(10552024..10585290)
Genome browser
AA seq
1270 aa
AA seq
DB search
MDLILICLLCGMYGALAKDQKGKYSVPILDVKARQLVLDTNQTLLLSCRGRWELSWTFPS
GLAMDEVQVEDSLCGRKSQQYCSGVTVSSTQARHTGLFRCRYRHRTQKLTSVYVYVTDSQ
QPFVEHPGMSPDVLYMKEKQPLVIPCRVTHPNITTTLVKYPNHSLSPDHRSILWNSKQGF
TIRAPTFYYIGFFYCQTITEGVTHKSRIYFVHRPVSNIMEVYLNSSGPVQALKGERLVLN
CTATGELNTRVNITWDYPGKNNNTGSTLKRLLKHRTHMLFYNILTIPKLQRSDRGLFTCR
VNSGENTKQQKVTVTVYDRPFIRLKPRHGSVMEVQAGQKSYRISPKLRAFPAPEVIWLKD
GMVAAEQCSRYHMDGSSLVIRDVAEEDAGKYAVLVRIQEHGLYQNLTLTLVVNVSPQIGE
KAVSLQDSGSVPRGSRQAHHCTTHGVPPPHIQWLWHPCPSKGLCVCPTSSSPWSRVTERI
PATSTRNHILSITHRQEVLQGKKKTVGVLTVAEAFVSGVYRCVASNSGGTDQLDFHFYVT
DVTGGFSVSQREEPREGGDLHLTCVANKYLYTALSWQRVNDTEDAQTSSPAMSSQQLTSG
EFSNRLVLLLSNLTARDSGAYRCSTRHLITGQEAQLDTQVVVTILEPPVLLSNLTDCTLN
ASSSVRLSCASEGIPPPTVTWYKDERALSQGSGIVISPEDGSLHIDRITAEDQGLYTCQA
TNVRGSAESSAYIWVNGATESSFLEIPALTCTCVVAALFWLLLTLFIRKLRQPSNANTKP
KYLSIILNSGEGPIEEQCERLKYDPNQWEFPRERLKLGKPLGRGAFGKVMQAAAFGIDDA
SSCRTVAVKMLKEGATASEHKALMTELKILNHIGHHLNVVNLLGACTKLGGPLMVIVEYC
RYGNISVFLKGKRDVFVHKTPTRGEDGGPGHVASMSEFDEKDKRENRLNSKSASNSPLFL
EDLISFSFQVARGMEFLASRKCIHRDLAARNILLSDNKVVKICDFGLARDIYKDPDYVRK
GDARLPLKWMSPESIFDKVFTPQSDVWSYGILLWEIFSLGASPYPGLYIDEEFCHRLKGG
TRMRAPEYSTPEIYSTMLACWEASPSDRPTFTNLVETLGDLLQERVQQDGKDYIPLGAFR
TGDTGRSETFKENVLSVTNLSYMRGMATLQTFEELPYNEPDGPDDEQSDSGMVLPSEEMK
RLTWNNGPKGRKLSRFFAFTKRRDPQVPFLCSDITGLWDNKPSILPCDWESDEGGSPPPD
YNSAFLYPSL
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggatttgatcctaatctgcctgctatgtggaatgtatggtgctcttgcaaaggatcaa
aaggggaagtacagcgtccctattctggatgtgaaagcccggcagctggtcctcgacacc
aaccagacactactgctcagctgcaggggtcgctgggagctgtcatggacgttcccatca
ggtttggccatggacgaggtgcaagtggaggactctctctgtgggaggaaaagccagcag
tactgcagcggtgtgacggtcagcagcacccaggcccggcacactggcctgttccgctgc
agataccgacaccggacccagaaactgacctccgtctatgtatatgttacagacagccag
cagccatttgtggagcatccgggtatgagcccagatgtgctgtacatgaaggagaagcag
ccgctggtcatcccctgccgggtcacccacccaaacatcacaaccacactcgtcaagtac
cccaaccacagcctgagtccagaccataggagcattttgtggaacagcaagcaaggcttc
accatccgagctcccacgttctattacatcggctttttctactgccagaccatcactgaa
ggcgtcacacacaagtcacgtatttactttgtacaccgaccagtgagtaacatcatggag
gtgtatctgaacagcagtggacctgtgcaggccctgaagggagagagattggtcttgaac
tgcaccgccaccggggagttgaacaccagggtcaacatcacctgggactaccctggaaag
aataacaacaccggctccactttgaaaaggctcctgaaacacagaacgcacatgttgttc
tacaatattctgaccatcccgaagctccagcgctcagaccgaggcctcttcacatgccgc
gtgaacagcggggaaaacaccaaacaacagaaagtcactgttaccgtctatgaccgtccg
tttattcgcctgaagcccagacatggatctgtgatggaggtacaggcaggacagaaatct
tacagaatctctcccaaactacgagcgttccccgcccctgaagtcatctggttgaaagat
ggcatggtggcagcagagcaatgctccagataccacatggatgggagttccctggtgatc
cgggatgtggcagaggaggatgctgggaaatacgctgtccttgtgcgaatccaggaacac
ggactctaccagaacctcacgctcacacttgtggttaatgtgagtcctcagataggggag
aaagcggtgtcgttgcaagactcgggctcagtgccgcgggggagcagacaagcccatcac
tgcacgacccacggagtccctcccccccacatccagtggctctggcatccctgcccgtcc
aaaggcctgtgtgtgtgtccaacgtcctcctcgccatggagccgtgtgacagagaggatc
cccgccacgtccacaagaaaccacatcctgagtattacgcacagacaggaagtgcttcag
gggaagaaaaagacagtgggggtcctgactgtggcagaggcctttgtgtctggagtgtat
cgctgcgttgcctccaactctggcggcacagaccagctagacttccacttctacgtcaca
gacgtcacaggaggcttcagtgtgagccagagggaggagcccagagagggcggagacctc
cacctcacctgtgtagccaataagtacctgtacaccgcgctgtcatggcaacgagtaaac
gatacagaggacgcccaaaccagcagcccggccatgagcagtcagcagctcacatccgga
gagttttccaatcggttggtcctgttgctaagcaacctgacagccagagactccggcgcc
tacagatgctccacccgccacctgatcaccggacaggaggcacagctggacacacaggtg
gtggtcacaattctggagcctccggtgctgctcagcaatctgacagattgtactctcaac
gccagcagctcagtgagactgagctgtgcctctgagggcatcccccccccaaccgtcaca
tggtacaaggatgaacgagccctgtctcagggatcaggtattgtgatatcaccagaagac
gggagcctccacattgatcggatcacagcggaggatcagggcctgtacacatgccaggcc
accaatgtgagggggtccgccgagagctctgcgtatatatgggtcaacggggccacagaa
tcctcatttctggagattcccgctctcacctgtacctgtgttgtggccgctctattctgg
cttttgctgacgctcttcatacgcaaactgagacagcccagtaacgctaacaccaaaccc
aagtacctgtccatcattctgaacagtggagaggggccaatagaggagcagtgtgagcga
ctgaaatacgaccccaaccaatgggagttccctcgggagcggctcaaattagggaaacct
ctgggccgtggcgccttcggtaaggtgatgcaggcagctgcttttggtatcgacgacgcc
tccagctgcaggactgtggctgttaagatgctcaaagagggagcgacagccagcgaacac
aaagctctgatgactgaactgaagatcctcaaccacattggacatcatctgaatgtcgtc
aacctactgggagcctgcaccaaactgggagggccactgatggtcatcgtggaatactgt
cgctacggaaatatttctgtcttcctgaagggaaagagagacgtgtttgtgcacaagacg
ccaaccaggggggaggatggagggcccggtcatgtcgccagcatgtctgagtttgatgag
aaagacaagagagaaaatcgcctcaattccaaatctgcctccaactctcccttattcctg
gaggatctcatctccttcagcttccaggtggcgcgaggaatggagtttctggcctcgcga
aagtgtattcaccgagacctggcagccaggaacattttgctttctgacaataaagtggtc
aagatctgtgacttcggcctggccagagacatctacaaagaccccgactacgtccgcaag
ggagacgcccgcctccctctgaagtggatgtctccagagtccatcttcgacaaggtgttc
accccgcagagtgacgtgtggtcctacggcattctgctgtgggagatcttctccttggga
gcctctccataccctggtctatacatagatgaagagttctgccacaggctgaagggggga
acaaggatgcgagcgcctgaatacagcacacctgagatttacagcacgatgctggcatgc
tgggaggccagtccctcggatcgacccaccttcactaacctggtggagaccctgggagac
ctgctgcaggagagggttcagcaggatggtaaggattatattcctctcggagctttcaga
actggagacactggtcggagtgagaccttcaaagaaaatgtgctttcagtcacaaacctg
agttacatgaggggcatggccacacttcagacgtttgaggaactcccctacaatgagccg
gacggccccgatgatgagcagagtgacagcggcatggtcctaccatccgaggaaatgaag
cgcctgacgtggaataacggccccaagggcaggaaactcagcaggttctttgccttcact
aagcgccgagacccacaggtgcctttcctgtgcagtgacatcacaggtctctgggacaac
aagccctccatcttgccgtgtgattgggagtctgacgagggcggctctcctcctccggac
tacaactctgcttttctctacccgtccctgtag
DBGET
integrated database retrieval system
