Pseudoliparis swirei (Mariana hadal snailfish): 130205915
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Entry
130205915 CDS
T09868
Symbol
flt1
Name
(RefSeq) vascular endothelial growth factor receptor 1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04020
Calcium signaling pathway
pswi04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130205915 (flt1)
04020 Calcium signaling pathway
130205915 (flt1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130205915 (flt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130205915 (flt1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130205915 (flt1)
Protein kinases [BR:
pswi01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
130205915 (flt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
VEGFR-1-like_Ig-like
Ig_2
ig
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
C2-set_2
C1-set
Ig_4
Ig_C17orf99
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
130205915
NCBI-ProteinID:
XP_056289443
LinkDB
All DBs
Position
16:complement(10552024..10585290)
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AA seq
1270 aa
AA seq
DB search
MDLILICLLCGMYGALAKDQKGKYSVPILDVKARQLVLDTNQTLLLSCRGRWELSWTFPS
GLAMDEVQVEDSLCGRKSQQYCSGVTVSSTQARHTGLFRCRYRHRTQKLTSVYVYVTDSQ
QPFVEHPGMSPDVLYMKEKQPLVIPCRVTHPNITTTLVKYPNHSLSPDHRSILWNSKQGF
TIRAPTFYYIGFFYCQTITEGVTHKSRIYFVHRPVSNIMEVYLNSSGPVQALKGERLVLN
CTATGELNTRVNITWDYPGKNNNTGSTLKRLLKHRTHMLFYNILTIPKLQRSDRGLFTCR
VNSGENTKQQKVTVTVYDRPFIRLKPRHGSVMEVQAGQKSYRISPKLRAFPAPEVIWLKD
GMVAAEQCSRYHMDGSSLVIRDVAEEDAGKYAVLVRIQEHGLYQNLTLTLVVNVSPQIGE
KAVSLQDSGSVPRGSRQAHHCTTHGVPPPHIQWLWHPCPSKGLCVCPTSSSPWSRVTERI
PATSTRNHILSITHRQEVLQGKKKTVGVLTVAEAFVSGVYRCVASNSGGTDQLDFHFYVT
DVTGGFSVSQREEPREGGDLHLTCVANKYLYTALSWQRVNDTEDAQTSSPAMSSQQLTSG
EFSNRLVLLLSNLTARDSGAYRCSTRHLITGQEAQLDTQVVVTILEPPVLLSNLTDCTLN
ASSSVRLSCASEGIPPPTVTWYKDERALSQGSGIVISPEDGSLHIDRITAEDQGLYTCQA
TNVRGSAESSAYIWVNGATESSFLEIPALTCTCVVAALFWLLLTLFIRKLRQPSNANTKP
KYLSIILNSGEGPIEEQCERLKYDPNQWEFPRERLKLGKPLGRGAFGKVMQAAAFGIDDA
SSCRTVAVKMLKEGATASEHKALMTELKILNHIGHHLNVVNLLGACTKLGGPLMVIVEYC
RYGNISVFLKGKRDVFVHKTPTRGEDGGPGHVASMSEFDEKDKRENRLNSKSASNSPLFL
EDLISFSFQVARGMEFLASRKCIHRDLAARNILLSDNKVVKICDFGLARDIYKDPDYVRK
GDARLPLKWMSPESIFDKVFTPQSDVWSYGILLWEIFSLGASPYPGLYIDEEFCHRLKGG
TRMRAPEYSTPEIYSTMLACWEASPSDRPTFTNLVETLGDLLQERVQQDGKDYIPLGAFR
TGDTGRSETFKENVLSVTNLSYMRGMATLQTFEELPYNEPDGPDDEQSDSGMVLPSEEMK
RLTWNNGPKGRKLSRFFAFTKRRDPQVPFLCSDITGLWDNKPSILPCDWESDEGGSPPPD
YNSAFLYPSL
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggatttgatcctaatctgcctgctatgtggaatgtatggtgctcttgcaaaggatcaa
aaggggaagtacagcgtccctattctggatgtgaaagcccggcagctggtcctcgacacc
aaccagacactactgctcagctgcaggggtcgctgggagctgtcatggacgttcccatca
ggtttggccatggacgaggtgcaagtggaggactctctctgtgggaggaaaagccagcag
tactgcagcggtgtgacggtcagcagcacccaggcccggcacactggcctgttccgctgc
agataccgacaccggacccagaaactgacctccgtctatgtatatgttacagacagccag
cagccatttgtggagcatccgggtatgagcccagatgtgctgtacatgaaggagaagcag
ccgctggtcatcccctgccgggtcacccacccaaacatcacaaccacactcgtcaagtac
cccaaccacagcctgagtccagaccataggagcattttgtggaacagcaagcaaggcttc
accatccgagctcccacgttctattacatcggctttttctactgccagaccatcactgaa
ggcgtcacacacaagtcacgtatttactttgtacaccgaccagtgagtaacatcatggag
gtgtatctgaacagcagtggacctgtgcaggccctgaagggagagagattggtcttgaac
tgcaccgccaccggggagttgaacaccagggtcaacatcacctgggactaccctggaaag
aataacaacaccggctccactttgaaaaggctcctgaaacacagaacgcacatgttgttc
tacaatattctgaccatcccgaagctccagcgctcagaccgaggcctcttcacatgccgc
gtgaacagcggggaaaacaccaaacaacagaaagtcactgttaccgtctatgaccgtccg
tttattcgcctgaagcccagacatggatctgtgatggaggtacaggcaggacagaaatct
tacagaatctctcccaaactacgagcgttccccgcccctgaagtcatctggttgaaagat
ggcatggtggcagcagagcaatgctccagataccacatggatgggagttccctggtgatc
cgggatgtggcagaggaggatgctgggaaatacgctgtccttgtgcgaatccaggaacac
ggactctaccagaacctcacgctcacacttgtggttaatgtgagtcctcagataggggag
aaagcggtgtcgttgcaagactcgggctcagtgccgcgggggagcagacaagcccatcac
tgcacgacccacggagtccctcccccccacatccagtggctctggcatccctgcccgtcc
aaaggcctgtgtgtgtgtccaacgtcctcctcgccatggagccgtgtgacagagaggatc
cccgccacgtccacaagaaaccacatcctgagtattacgcacagacaggaagtgcttcag
gggaagaaaaagacagtgggggtcctgactgtggcagaggcctttgtgtctggagtgtat
cgctgcgttgcctccaactctggcggcacagaccagctagacttccacttctacgtcaca
gacgtcacaggaggcttcagtgtgagccagagggaggagcccagagagggcggagacctc
cacctcacctgtgtagccaataagtacctgtacaccgcgctgtcatggcaacgagtaaac
gatacagaggacgcccaaaccagcagcccggccatgagcagtcagcagctcacatccgga
gagttttccaatcggttggtcctgttgctaagcaacctgacagccagagactccggcgcc
tacagatgctccacccgccacctgatcaccggacaggaggcacagctggacacacaggtg
gtggtcacaattctggagcctccggtgctgctcagcaatctgacagattgtactctcaac
gccagcagctcagtgagactgagctgtgcctctgagggcatcccccccccaaccgtcaca
tggtacaaggatgaacgagccctgtctcagggatcaggtattgtgatatcaccagaagac
gggagcctccacattgatcggatcacagcggaggatcagggcctgtacacatgccaggcc
accaatgtgagggggtccgccgagagctctgcgtatatatgggtcaacggggccacagaa
tcctcatttctggagattcccgctctcacctgtacctgtgttgtggccgctctattctgg
cttttgctgacgctcttcatacgcaaactgagacagcccagtaacgctaacaccaaaccc
aagtacctgtccatcattctgaacagtggagaggggccaatagaggagcagtgtgagcga
ctgaaatacgaccccaaccaatgggagttccctcgggagcggctcaaattagggaaacct
ctgggccgtggcgccttcggtaaggtgatgcaggcagctgcttttggtatcgacgacgcc
tccagctgcaggactgtggctgttaagatgctcaaagagggagcgacagccagcgaacac
aaagctctgatgactgaactgaagatcctcaaccacattggacatcatctgaatgtcgtc
aacctactgggagcctgcaccaaactgggagggccactgatggtcatcgtggaatactgt
cgctacggaaatatttctgtcttcctgaagggaaagagagacgtgtttgtgcacaagacg
ccaaccaggggggaggatggagggcccggtcatgtcgccagcatgtctgagtttgatgag
aaagacaagagagaaaatcgcctcaattccaaatctgcctccaactctcccttattcctg
gaggatctcatctccttcagcttccaggtggcgcgaggaatggagtttctggcctcgcga
aagtgtattcaccgagacctggcagccaggaacattttgctttctgacaataaagtggtc
aagatctgtgacttcggcctggccagagacatctacaaagaccccgactacgtccgcaag
ggagacgcccgcctccctctgaagtggatgtctccagagtccatcttcgacaaggtgttc
accccgcagagtgacgtgtggtcctacggcattctgctgtgggagatcttctccttggga
gcctctccataccctggtctatacatagatgaagagttctgccacaggctgaagggggga
acaaggatgcgagcgcctgaatacagcacacctgagatttacagcacgatgctggcatgc
tgggaggccagtccctcggatcgacccaccttcactaacctggtggagaccctgggagac
ctgctgcaggagagggttcagcaggatggtaaggattatattcctctcggagctttcaga
actggagacactggtcggagtgagaccttcaaagaaaatgtgctttcagtcacaaacctg
agttacatgaggggcatggccacacttcagacgtttgaggaactcccctacaatgagccg
gacggccccgatgatgagcagagtgacagcggcatggtcctaccatccgaggaaatgaag
cgcctgacgtggaataacggccccaagggcaggaaactcagcaggttctttgccttcact
aagcgccgagacccacaggtgcctttcctgtgcagtgacatcacaggtctctgggacaac
aagccctccatcttgccgtgtgattgggagtctgacgagggcggctctcctcctccggac
tacaactctgcttttctctacccgtccctgtag
DBGET
integrated database retrieval system
