KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130206202
Entry
130206202         CDS       T09868                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00052  Galactose metabolism
pswi00510  N-Glycan biosynthesis
pswi00513  Various types of N-glycan biosynthesis
pswi00514  Other types of O-glycan biosynthesis
pswi00515  Mannose type O-glycan biosynthesis
pswi00533  Glycosaminoglycan biosynthesis - keratan sulfate
pswi00601  Glycosphingolipid biosynthesis - lacto and neolacto series
pswi01100  Metabolic pathways
Module
pswi_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
pswi_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    130206202
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    130206202
   00513 Various types of N-glycan biosynthesis
    130206202
   00515 Mannose type O-glycan biosynthesis
    130206202
   00514 Other types of O-glycan biosynthesis
    130206202
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    130206202
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    130206202
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:pswi01003]
    130206202
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pswi04131]
    130206202
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pswi04147]
    130206202
Enzymes [BR:pswi01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     130206202
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     130206202
    2.4.1.90  N-acetyllactosamine synthase
     130206202
Glycosyltransferases [BR:pswi01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   130206202
Membrane trafficking [BR:pswi04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    130206202
Exosome [BR:pswi04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   130206202
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2 CHGN
Other DBs
NCBI-GeneID: 130206202
NCBI-ProteinID: XP_056290022
LinkDB
Position
16:14152583..14155521
AA seq 353 aa
MMQKYFNRLALFAFFSVTCFVLILFYNKEGTLYFLSKHYPDTNGNDSLSQLIKEVAEMKM
KVLNASHEETQMTTTKSKPLGRCPDNPPQLVGPLHVEFDSKRTLDQVRKLISSRLQEGGR
YKPPDCVSQQKVAIIIAFRNRHEHLIHWLYYLHPILMRQQLDYTVYIVNQDGEGVFNRAK
LMNAGYVEAMKQYDHDCFVFSDIDLIPLDDRNLYRCFDNPRHLAVAMDKFNFQLPYNNFF
GGVSSLSKGQYLKINGFPNTFWGWGGEDDDIYNRIVCRGLSISRPNSVMGKYKMIKHERD
AHNEPNPKNAGKLSQTRQTMDRDGISSLKYTVKEIKKDILYTFITVDIEAPLG
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgatgcaaaaatattttaataggctggcactttttgcttttttcagtgtgacatgtttt
gttctgattctattttacaacaaagagggcactttatattttttgtcaaagcactatcct
gatacaaatgggaatgacagcctttcccagttgataaaagaagtagctgaaatgaagatg
aaagtcctaaatgccagtcacgaagagacacagatgacaaccactaagagcaagcctttg
ggacgctgccctgacaaccctccacaacttgtgggtccactccatgttgagtttgattct
aaacggactttggaccaggtgagaaagttaatcagttctcgtcttcaggaaggaggacgg
tataagcctccggactgcgtttcccaacagaaggtggcgatcatcatcgcatttcgcaat
cggcatgagcaccttattcattggctgtattacctccatcctatattgatgcggcagcag
ttggactacaccgtgtatatcgtcaaccaggatggagaaggcgtgttcaaccgggctaaa
ctgatgaatgccggctacgtggaagcaatgaagcaatatgatcacgactgctttgtcttc
tcggacatagatttgatccctctggatgaccgaaacctttacagatgttttgacaatcct
cgacacttggctgtggctatggacaaattcaacttccaattaccctacaacaatttcttt
ggtggagtttcctcattgtctaagggccaatacttaaagattaacggcttcccgaacacg
ttctggggctgggggggtgaggacgacgatatctataaccgaattgtctgccgtggcctg
tccatttctcgacctaactcggtgatgggaaagtacaagatgatcaaacatgagagagac
gcgcacaatgagcccaatccaaagaatgccggtaaactgagccaaacccggcagaccatg
gatagagatggaattagttctctcaaatacacagtgaaggagattaagaaggatatactg
tacactttcatcaccgtggatattgaggctccgcttggatga

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