Pseudoliparis swirei (Mariana hadal snailfish): 130206230
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Entry
130206230 CDS
T09868
Symbol
ptgdsb.1
Name
(RefSeq) prostaglandin D2 synthase b, tandem duplicate 1
KO
K01830
prostaglandin-H2 D-isomerase [EC:
5.3.99.2
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00590
Arachidonic acid metabolism
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09103 Lipid metabolism
00590 Arachidonic acid metabolism
130206230 (ptgdsb.1)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.99 Other intramolecular oxidoreductases
5.3.99.2 prostaglandin-D synthase
130206230 (ptgdsb.1)
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Gene cluster
GFIT
Motif
Pfam:
Lipocalin
Triabin
VDE
Motif
Other DBs
NCBI-GeneID:
130206230
NCBI-ProteinID:
XP_056290064
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All DBs
Position
16:13082257..13084801
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AA seq
182 aa
AA seq
DB search
MRNTMLGMLGALMCVLAACAKVVPVQDFDLEKMAGKWYIVGLATNAKWFVNNKAVMKTTT
AMLVPTGGDLNLTYANLNADGSCWRTTQLANKTDTPGHFSFHSHIWNNDNDMQIVDVAYD
EYALVYTVKTQESVSEVLTQLYSRTPEVTLVLQQKFTQFSLENGALPDNVVILSQNGECP
LV
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacacaatgctggggatgctgggcgccctgatgtgtgtgctggcggcctgcgcc
aaggtcgtgcccgttcaagacttcgacctggagaagatggcaggcaagtggtatatcgtt
ggcttggccacgaatgccaagtggttcgtgaacaacaaggcagtgatgaagaccactact
gccatgttagtgcccactggaggagacctgaacctcacctatgccaacctgaatgctgat
ggttcctgctggagaacgacccaacttgctaataaaacggacacacctggacacttctcc
ttccacagccacatttggaacaatgacaacgacatgcagattgtggacgtggcgtacgat
gaatacgctctggtctacactgtcaagacacaggagagcgtgtcggaggtcctcacccag
ctctacagtcgcactcctgaggtcacgctggtcctgcagcagaagtttacccagttctcc
ctggagaatggcgccctccctgacaacgttgttatcttgtctcagaatggcgagtgtccc
ctggtctga
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